RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 SUSD3Q96L08 255 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 SENP8Q96LD8 212 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 MTMR12Q9C0I1 747 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 KCTD10Q9H3F6 313 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 PLEKHA4Q9H4M7 779 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 BARX2Q9UMQ3 279 aaPredicted RBP10.32□□□□□ -0.76
PKP4-208ENST00000462335 POLIQ9UNA4 740 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 HCFC2Q9Y5Z7 792 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 CDY1Q9Y6F8 540 aa10.32□□□□□ -0.76
PKP4-208ENST00000462335 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 PIRO00625 290 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 EPCAMP16422 314 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 PTMSP20962 102 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 MTHFRP42898 656 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 VAMP7P51809 220 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 ITIH3Q06033 890 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 SMAD4Q13485 552 aaKnown RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 EDRF1Q3B7T1 1238 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CCDC40Q4G0X9 1142 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 ANKRD54Q6NXT1 300 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CLEC17AQ6ZS10 378 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CCDC149Q6ZUS6 474 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 INTS8Q75QN2 995 aaKnown RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 EFCAB13Q8IY85 973 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 ELMOD1Q8N336 334 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 LRRC52Q8N7C0 313 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 KREMEN2Q8NCW0 462 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 ZSWIM2Q8NEG5 633 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 LNX1Q8TBB1 728 aaPredicted RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 SYAP1Q96A49 352 aaPredicted RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 MFSD14AQ96MC6 490 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 POP1Q99575 1024 aaKnown RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 CGRRF1Q99675 332 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 VN1R3Q9BXE9 311 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CLSTN2Q9H4D0 955 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 SFXN1Q9H9B4 322 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 TIMM13Q9Y5L4 95 aaPredicted RBP10.31□□□□□ -0.76
PKP4-208ENST00000462335 SNX9Q9Y5X1 595 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 BACE2Q9Y5Z0 518 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CHD7Q9P2D1 2997 aa10.31□□□□□ -0.76
PKP4-208ENST00000462335 CCDC195A0A1B0GUA6 201 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 OR6C75A6NL08 312 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TGM5O43548 720 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 XYLBO75191 536 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TYMPP19971 482 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 KCNQ1P51787 676 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 CLCN4P51793 760 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 MYL7Q01449 175 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TSPY1Q01534 308 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 CETN1Q12798 172 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TAF12Q16514 161 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 SASS6Q6UVJ0 657 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TMC5Q6UXY8 1006 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TMEM184AQ6ZMB5 413 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TRAPPC11Q7Z392 1133 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 ADSSL1Q8N142 457 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 C3orf58Q8NDZ4 430 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 HDAC7Q8WUI4 952 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 NELFBQ8WX92 580 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 NECTIN4Q96NY8 510 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 CYP4F11Q9HBI6 524 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 LMBRD1Q9NUN5 540 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 DMAC2Q9NW81 257 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 MTRRQ9UBK8 725 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 NXF1Q9UBU9 619 aaKnown RBP10.3□□□□□ -0.76
PKP4-208ENST00000462335 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
PKP4-208ENST00000462335 TRANK1O15050 2925 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 M0QZQ0 153 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 IKBKBO14920 756 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 MAPK13O15264 365 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 MEFVO15553 781 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 LILRB3O75022 631 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 TBX10O75333 385 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 C1RP00736 705 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 LRG1P02750 347 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 CCNE1P24864 410 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 ATICP31939 592 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 CASP4P49662 377 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 RBM10P98175 930 aaKnown RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 DLX2Q07687 328 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 PAK1Q13153 545 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms