RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PPP1R12AO14974 1030 aaPredicted RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 LUC7L3O95232 432 aaKnown RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 MYBL1P10243 752 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 KRT10P13645 584 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 CA4P22748 312 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 LMBRD2Q68DH5 695 aaPredicted RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 RGS9BPQ6ZS82 235 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 TTC8Q8TAM2 541 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 LRRC8CQ8TDW0 803 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 MFSD14AQ96MC6 490 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 OSBPL1AQ9BXW6 950 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 AGO4Q9HCK5 861 aaKnown RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 DNPEPQ9ULA0 475 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 EXOC7Q9UPT5 735 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 A0A1W2PPM1 405 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 DENND3A2RUS2 1198 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 PI4K2BG5E9Z4 385 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 H0Y3Z8 333 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 DNALI1O14645 258 aaPredicted RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 DCTN3O75935 186 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 PECAM1P16284 738 aaPredicted RBP19.53■□□□□ 0.72
HPS3-204ENST00000462030 DSG3P32926 999 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 NPTX2P47972 431 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 GCNT1Q02742 428 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 NR1H3Q13133 447 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 ATP13A4Q4VNC1 1196 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 KAZNQ674X7 775 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 KATNAL2Q8IYT4 538 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 TMC2Q8TDI7 906 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 CHURC1Q8WUH1 139 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 AGBL1Q96MI9 1066 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 NUDCD1Q96RS6 583 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 SMC6Q96SB8 1091 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 USP21Q9UK80 565 aa19.53■□□□□ 0.72
HPS3-204ENST00000462030 LINGO3P0C6S8 592 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 SOX10P56693 466 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 XKR9Q5GH70 373 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 TDRPQ86YL5 185 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 TRIM11Q96F44 468 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 VPS37BQ9H9H4 285 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 LRRC42Q9Y546 428 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 NUMBLQ9Y6R0 609 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 EP400Q96L91 3159 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 ZNF536O15090 1300 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 ZNF646O15015 1829 aaPredicted RBP19.52■□□□□ 0.72
HPS3-204ENST00000462030 A6NHS1 94 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 CLGNO14967 610 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 CYP1A1P04798 512 aaPredicted RBP19.52■□□□□ 0.72
HPS3-204ENST00000462030 NPR1P16066 1061 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 TAF1BQ53T94 588 aaPredicted RBP19.52■□□□□ 0.72
HPS3-204ENST00000462030 OTOAQ7RTW8 1153 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 OGFOD1Q8N543 542 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 SUPT20HQ8NEM7 779 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 BSNDQ8WZ55 320 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 PRMT6Q96LA8 375 aaPredicted RBP19.52■□□□□ 0.72
HPS3-204ENST00000462030 C1orf112Q9NSG2 853 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 SERPINA10Q9UK55 444 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 SYNPO2Q9UMS6 1093 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.52■□□□□ 0.72
HPS3-204ENST00000462030 PCDHB2Q9Y5E7 798 aa19.52■□□□□ 0.72
HPS3-204ENST00000462030 NFIBO00712 420 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 LIASO43766 372 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ECE2O60344 883 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ENTPD3O75355 529 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ENTPD5O75356 428 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 TCF4P15884 667 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ALDH3A1P30838 453 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ARMC2Q8NEN0 867 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 FBXL18Q96ME1 805 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ZFATQ9P243 1243 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 SMG5Q9UPR3 1016 aaKnown RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 BANF1O75531 89 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 LYPLA2O95372 231 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 HSD17B4P51659 736 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ARSEP51690 589 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 IRX1P78414 480 aaPredicted RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 MRPS9P82933 396 aaKnown RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 MAMLD1Q13495 774 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 SPOPLQ6IQ16 392 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ANO7Q6IWH7 933 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 EXD1Q8NHP7 514 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ZNF516Q92618 1163 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 ANKRD27Q96NW4 1050 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 MAK16Q9BXY0 300 aaKnown RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 FOXP3Q9BZS1 431 aa19.51■□□□□ 0.71
HPS3-204ENST00000462030 DENND2DQ9H6A0 471 aaPredicted RBP19.51■□□□□ 0.71
HPS3-204ENST00000462030 TYROBPO43914 113 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 GTF2H1P32780 548 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 GPS1Q13098 491 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 LVRNQ6Q4G3 990 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 ENOSF1Q7L5Y1 443 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 CCDC125Q86Z20 511 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 ZBED8Q8IZ13 594 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 YIPF3Q9GZM5 350 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 CYLDQ9NQC7 956 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 ZNF148Q9UQR1 794 aa19.5■□□□□ 0.71
HPS3-204ENST00000462030 COL11A2P13942 1736 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms