RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 TUSC3Q13454 348 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 ALCAMQ13740 583 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 FOXR2Q6PJQ5 311 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 LNX1Q8TBB1 728 aaPredicted RBP16.87■□□□□ 0.29
SF3A3-203ENST00000461869 NELFBQ8WX92 580 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 KIFAP3Q92845 792 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 FGF13Q92913 245 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 POLIQ9UNA4 740 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 MTCL1Q9Y4B5 1905 aaKnown RBP16.87■□□□□ 0.29
SF3A3-203ENST00000461869 UBE4BO95155 1302 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 DOCK8Q8NF50 2099 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 DCHS1Q96JQ0 3298 aa16.87■□□□□ 0.29
SF3A3-203ENST00000461869 KANSL1LA0AUZ9 987 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 LRRIQ4A6NIV6 560 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 EIF3DO15371 548 aaKnown RBP eCLIP16.86■□□□□ 0.29
SF3A3-203ENST00000461869 CCL16O15467 120 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 HIP1RO75146 1068 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 KIF4AO95239 1232 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
SF3A3-203ENST00000461869 CCNE1P24864 410 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 PUM1Q14671 1186 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■□□□ 11.7
SF3A3-203ENST00000461869 PSMD5Q16401 504 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 TPD52L1Q16890 204 aaPredicted RBP16.86■□□□□ 0.29
SF3A3-203ENST00000461869 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 MTSS1LQ765P7 747 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 MAEAQ7L5Y9 396 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 MAML2Q8IZL2 1156 aaPredicted RBP16.86■□□□□ 0.29
SF3A3-203ENST00000461869 DCLK2Q8N568 766 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 BCO2Q9BYV7 579 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 C17orf75Q9HAS0 396 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 PRMT7Q9NVM4 692 aaPredicted RBP16.86■□□□□ 0.29
SF3A3-203ENST00000461869 KCNG1Q9UIX4 513 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 NFE2L3Q9Y4A8 694 aa16.86■□□□□ 0.29
SF3A3-203ENST00000461869 XYLBO75191 536 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 THP07101 528 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 HOXA9P31269 272 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 ABCD1P33897 745 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 PRKCQQ04759 706 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 NCAPHQ15003 741 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 MLF2Q15773 248 aaPredicted RBP16.85■□□□□ 0.29
SF3A3-203ENST00000461869 SLC44A4Q53GD3 710 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 SARM1Q6SZW1 724 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 MYCT1Q8N699 235 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 ITFG1Q8TB96 612 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
SF3A3-203ENST00000461869 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 TSG101Q99816 390 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 MRPL44Q9H9J2 332 aaKnown RBP16.85■□□□□ 0.29
SF3A3-203ENST00000461869 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 SPATA6Q9NWH7 488 aaPredicted RBP16.85■□□□□ 0.29
SF3A3-203ENST00000461869 MYH11P35749 1972 aa16.85■□□□□ 0.29
SF3A3-203ENST00000461869 PTGESO14684 152 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 ADAM12O43184 909 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 LAMTOR5O43504 91 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 PLS3P13797 630 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 SCP2P22307 547 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 ELAVL2Q12926 359 aaKnown RBP16.84■□□□□ 0.29
SF3A3-203ENST00000461869 MAPK7Q13164 816 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 PDXDC1Q6P996 788 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 SUMF1Q8NBK3 374 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 SLC7A14Q8TBB6 771 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
SF3A3-203ENST00000461869 FZD8Q9H461 694 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 SNTG2Q9NY99 539 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 MAPK8IP1Q9UQF2 711 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 MTF2Q9Y483 593 aaPredicted RBP16.84■□□□□ 0.29
SF3A3-203ENST00000461869 SPTBN4Q9H254 2564 aa16.84■□□□□ 0.29
SF3A3-203ENST00000461869 FAM170BA6NMN3 283 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 H0YCG3 227 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 N4BP3O15049 544 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 RECQL4O94761 1208 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 GCNT3O95395 438 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 FGFR1OPO95684 399 aaKnown RBP16.83■□□□□ 0.28
SF3A3-203ENST00000461869 PLCB2Q00722 1185 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 PFKPQ01813 784 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 SPAG1Q07617 926 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 DMP1Q13316 513 aaPredicted RBP16.83■□□□□ 0.28
SF3A3-203ENST00000461869 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 BMT2Q1RMZ1 405 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
SF3A3-203ENST00000461869 CENPPQ6IPU0 288 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 ANKRD20A12PQ8NF67 263 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 HPS3Q969F9 1004 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 KXD1Q9BQD3 176 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 CXCL16Q9H2A7 254 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 PDZD7Q9H5P4 517 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 FBXO4Q9UKT5 387 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.28
SF3A3-203ENST00000461869 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
SF3A3-203ENST00000461869 OR1D2P34982 312 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms