RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SPATA1Q5VX52 437 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 USP34Q70CQ2 3546 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ZNF720Q7Z2F6 126 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 PDILTQ8N807 584 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 GPR152Q8TDT2 470 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 FGF14Q92915 247 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 RTP3Q9BQQ7 232 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ASB7Q9H672 318 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 ARHGEF3Q9NR81 526 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 MAFFQ9ULX9 164 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 C2CD2Q9Y426 696 aa15.13■□□□□ 0.01
USP4-206ENST00000461553 TICRRQ7Z2Z1 1910 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 OR6C75A6NL08 312 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 STK25O00506 426 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 SPTLC2O15270 562 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 PTPN2P17706 415 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 TYMPP19971 482 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 PAX3P23760 479 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 SLC5A9Q2M3M2 681 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 C9orf57Q5W0N0 161 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 IQCEQ6IPM2 695 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 PARM1Q6UWI2 310 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 PDZD4Q76G19 769 aaPredicted RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 LINC00301Q8NCQ3 95 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 ST13P5Q8NFI4 369 aaPredicted RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 ATOH1Q92858 354 aaPredicted RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 SLC2A4RGQ9NR83 387 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 FAM86C1Q9NVL1 165 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 TIMM13Q9Y5L4 95 aaPredicted RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 STYXL1Q9Y6J8 313 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 ZNF638Q14966 1978 aaKnown RBP15.12■□□□□ 0.01
USP4-206ENST00000461553 PATJQ8NI35 1801 aa15.12■□□□□ 0.01
USP4-206ENST00000461553 VPS13AQ96RL7 3174 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 A0A087X0B3 334 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PPEF2O14830 753 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PPP6R2O75170 966 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 OAZ2O95190 189 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 SEC24AO95486 1093 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 YEATS4O95619 227 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PDIA4P13667 645 aaKnown RBP15.11■□□□□ 0.01
USP4-206ENST00000461553 NPR3P17342 541 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 CEBPBP17676 345 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 POU5F1Q01860 360 aaKnown RBP15.11■□□□□ 0.01
USP4-206ENST00000461553 TWF1Q12792 350 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PLD1Q13393 1074 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 CCDC65Q8IXS2 484 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 KXD1Q9BQD3 176 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 TNMDQ9H2S6 317 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 TBC1D17Q9HA65 648 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PANK4Q9NVE7 773 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 YIPF1Q9Y548 306 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 PCDHB13Q9Y5F0 798 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 DENND4CQ5VZ89 1909 aa15.11■□□□□ 0.01
USP4-206ENST00000461553 OBSL1O75147 1896 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 FRMD3A2A2Y4 597 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 KRBA1A5PL33 1030 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 H0Y858 1186 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 ZNF197O14709 1029 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 IL18RAPO95256 599 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 OR4Q2P0C623 313 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 LILRA4P59901 499 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 CYP4A22Q5TCH4 519 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
USP4-206ENST00000461553 RNF19BQ6ZMZ0 732 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 STXBP4Q6ZWJ1 553 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 NT5DC4Q86YG4 428 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 CCDC105Q8IYK2 499 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 LEMD2Q8NC56 503 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
USP4-206ENST00000461553 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 ZNF560Q96MR9 790 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 PGLYRP2Q96PD5 576 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 STRA6Q9BX79 667 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 PANK2Q9BZ23 570 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 LRRC27Q9C0I9 530 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 CUEDC2Q9H467 287 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 ASAH2Q9NR71 780 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 GDE1Q9NZC3 331 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 DMDP11532 3685 aa15.1■□□□□ 0.01
USP4-206ENST00000461553 COL4A2P08572 1712 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 FANCMQ8IYD8 2048 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
USP4-206ENST00000461553 PIRO00625 290 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 ADSSP30520 456 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 TAF6P49848 677 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 CASP5P51878 434 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 PFKPQ01813 784 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 KCNA1Q09470 495 aa15.09■□□□□ 0.01
USP4-206ENST00000461553 MYBPC2Q14324 1141 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms