RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TAF6P49848 677 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 BIRC3Q13489 604 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 NCOA4Q13772 614 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 ADGRE1Q14246 886 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 MIIPQ5JXC2 388 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 FAM171A1Q5VUB5 890 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 CREBRFQ8IUR6 639 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 ELMO3Q96BJ8 720 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 HPDLQ96IR7 371 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 HERC2P3Q9BVR0 1158 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 TSPY26PQ9H489 355 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 COQ4Q9Y3A0 265 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 NUB1Q9Y5A7 615 aa12.14□□□□□ -0.47
SSBP1-202ENST00000461433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSBP1-202ENST00000461433 REV3LO60673 3130 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 SMTNL1A8MU46 457 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LILRB3O75022 631 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PHACTR2O75167 634 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 CTSAP10619 480 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PAX3P23760 479 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 TKTP29401 623 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PNPLA4P41247 253 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 MTIF2P46199 727 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 MXI1P50539 228 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 DSG1Q02413 1049 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 RTP2Q5QGT7 225 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 SENP8Q96LD8 212 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 TLR9Q9NR96 1032 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PUF60Q9UHX1 559 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PCDHGC5Q9Y5F6 944 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 TRAPPC3O43617 180 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 POU3F3P20264 500 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 ATICP31939 592 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 TRPC3Q13507 836 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 KRT31Q15323 416 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 USP41Q3LFD5 358 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 SV2CQ496J9 727 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 DEFB123Q8N688 67 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LMO3Q8TAP4 145 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 FAM200AQ8TCP9 573 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 AUTS2Q8WXX7 1259 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 TCF25Q9BQ70 676 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 STK39Q9UEW8 545 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
SSBP1-202ENST00000461433 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
SSBP1-202ENST00000461433 HIDE1A8MVS5 230 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 CYB561D2O14569 222 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 SYN3O14994 580 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 P4HA2O15460 535 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 CYP11A1P05108 521 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 PTPN14Q15678 1187 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 SOWAHAQ2M3V2 549 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 SPOPLQ6IQ16 392 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 LNX1Q8TBB1 728 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-202ENST00000461433 MRPL38Q96DV4 380 aaKnown RBP12.12□□□□□ -0.47
SSBP1-202ENST00000461433 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-202ENST00000461433 TTPALQ9BTX7 342 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
SSBP1-202ENST00000461433 MTMR10Q9NXD2 777 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-202ENST00000461433 SNX9Q9Y5X1 595 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
SSBP1-202ENST00000461433 MYO7AQ13402 2215 aa12.11□□□□□ -0.47
SSBP1-202ENST00000461433 C2orf71A6NGG8 1288 aa12.11□□□□□ -0.47
SSBP1-202ENST00000461433 BECN2A8MW95 431 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms