RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 SAT1P21673 171 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 TBXAS1P24557 533 aaPredicted RBP15.25■□□□□ 0.03
NCL-207ENST00000461347 RARRES1P49788 294 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 NAIF1Q69YI7 327 aaPredicted RBP15.25■□□□□ 0.03
NCL-207ENST00000461347 SPOPLQ6IQ16 392 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 PRUNE1Q86TP1 453 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 CERS5Q8N5B7 392 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 NAF1Q96HR8 494 aaKnown RBP15.25■□□□□ 0.03
NCL-207ENST00000461347 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 SEPT10Q9P0V9 454 aa15.25■□□□□ 0.03
NCL-207ENST00000461347 SPECC1L-ADORA2AF8WAN1 911 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 NVLO15381 856 aaKnown RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 PRPSAP2O60256 369 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 CCDC22O60826 627 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 TMEM154Q6P9G4 183 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 RIBC1Q8N443 379 aaPredicted RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 DLGAP2Q9P1A6 1054 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 NRAPQ86VF7 1730 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 SYNJ2BP-COX16A0A087WUM0 186 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 STK10O94804 968 aaKnown RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 CBX6O95503 412 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 ENO1P06733 434 aaKnown RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 PCNX4Q63HM2 1172 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 ANKRD36BP1Q96IX9 119 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 COX16Q9P0S2 106 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 USP20Q9Y2K6 914 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 CST8O60676 142 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 GH1P01241 217 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 NCF2P19878 526 aaPredicted RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 NPTX2P47972 431 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 SEZ6Q53EL9 994 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 FEZF2Q8TBJ5 459 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 RAB3IL1Q8TBN0 382 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 CKAP2Q8WWK9 683 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 CCDC124Q96CT7 223 aaKnown RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 MAGED2Q9UNF1 606 aaPredicted RBP15.24■□□□□ 0.03
NCL-207ENST00000461347 TTLL3Q9Y4R7 772 aa15.24■□□□□ 0.03
NCL-207ENST00000461347 GJB6O95452 261 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 KRT16P08779 473 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 P4HA1P13674 534 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 CREB1P16220 341 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 TM4SF1P30408 202 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 IGBP1P78318 339 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 PPATQ06203 517 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 SLFN11Q7Z7L1 901 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 TLCD1Q96CP7 247 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 CDHR1Q96JP9 859 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 FOXP3Q9BZS1 431 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 TMEM59LQ9UK28 342 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 MYH7P12883 1935 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 F5H423 210 aaPredicted RBP15.23■□□□□ 0.03
NCL-207ENST00000461347 PSMC4P43686 418 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 EIF3EP60228 445 aaKnown RBP15.23■□□□□ 0.03
NCL-207ENST00000461347 TNFAIP1Q13829 316 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 MAP7D1Q3KQU3 841 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 GRAMD1BQ3KR37 738 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 ANKRD20A2Q5SQ80 823 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 ANKRD20A1Q5TYW2 823 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
NCL-207ENST00000461347 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
NCL-207ENST00000461347 PPP1R16BQ96T49 567 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 TMEM121Q9BTD3 319 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 KIF9Q9HAQ2 790 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 KCNQ5Q9NR82 932 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 HEY2Q9UBP5 337 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 BCL9LQ86UU0 1499 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 PROSCO94903 275 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 KRT7P08729 469 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 JAM2P57087 298 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 NCALDP61601 193 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 GABPAQ06546 454 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 NCOA4Q13772 614 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 NXNQ6DKJ4 435 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 NUDCD3Q8IVD9 361 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 CDKL2Q92772 493 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 NLRP4Q96MN2 994 aa15.23■□□□□ 0.03
NCL-207ENST00000461347 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
NCL-207ENST00000461347 CCNG2Q16589 344 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 CLEC16AQ2KHT3 1053 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 TAF1BQ53T94 588 aaPredicted RBP15.22■□□□□ 0.03
NCL-207ENST00000461347 MCOLN2Q8IZK6 566 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 CYP4F11Q9HBI6 524 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 NWD2Q9ULI1 1742 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 ANKRD63C9JTQ0 380 aa15.22■□□□□ 0.03
NCL-207ENST00000461347 NFIBO00712 420 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms