RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 USP34Q70CQ2 3546 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TTC26A0AVF1 554 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 TBCAO75347 108 aaKnown RBP16.43■□□□□ 0.22
COL16A1-206ENST00000461217 GRM2Q14416 872 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 KYAT1Q16773 422 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 ZBTB41Q5SVQ8 909 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 RNF19BQ6ZMZ0 732 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 TMEM130Q8N3G9 435 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 BRD9Q9H8M2 597 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 RPF1Q9H9Y2 349 aaKnown RBP16.43■□□□□ 0.22
COL16A1-206ENST00000461217 ASAH2Q9NR71 780 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 HEBP1Q9NRV9 189 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 MRPS17Q9Y2R5 130 aaKnown RBP16.43■□□□□ 0.22
COL16A1-206ENST00000461217 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
COL16A1-206ENST00000461217 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 OGTO15294 1046 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 NCAM2O15394 837 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 SLC26A4O43511 780 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 PTMSP20962 102 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 LRPAP1P30533 357 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 CCR2P41597 374 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 ID4P47928 161 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 FAM78AQ5JUQ0 283 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 ZNF852Q6ZMS4 543 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 PGLYRP2Q96PD5 576 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 NELL2Q99435 816 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 TRMT61BQ9BVS5 477 aaKnown RBP16.42■□□□□ 0.22
COL16A1-206ENST00000461217 OSBPL6Q9BZF3 934 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 PARVGQ9HBI0 331 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 CEP72Q9P209 647 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 MAFFQ9ULX9 164 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 YIPF1Q9Y548 306 aa16.42■□□□□ 0.22
COL16A1-206ENST00000461217 M0QZQ0 153 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 TRAK2O60296 914 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
COL16A1-206ENST00000461217 MICAL2O94851 1124 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 BMP15O95972 392 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 GJA1P17302 382 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 PLCG1P19174 1290 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 CYP3A5P20815 502 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 SCP2P22307 547 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 FCARP24071 287 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 TARSP26639 723 aaKnown RBP16.41■□□□□ 0.22
COL16A1-206ENST00000461217 MAGEA9P43362 315 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 KRT85P78386 507 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 PLD1Q13393 1074 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 MCM6Q14566 821 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
COL16A1-206ENST00000461217 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
COL16A1-206ENST00000461217 DNASE1L2Q92874 299 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
COL16A1-206ENST00000461217 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
COL16A1-206ENST00000461217 OR6C75A6NL08 312 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 ODC1P11926 461 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
COL16A1-206ENST00000461217 CSTF1Q05048 431 aaKnown RBP16.4■□□□□ 0.22
COL16A1-206ENST00000461217 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 OVOS1Q6IE37 1185 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 POTEHQ6S545 545 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 MAML2Q8IZL2 1156 aaPredicted RBP16.4■□□□□ 0.22
COL16A1-206ENST00000461217 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 RAD54LQ92698 747 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 IRF7Q92985 503 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 BLOC1S4Q9NUP1 217 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 FBXO4Q9UKT5 387 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 NDRG2Q9UN36 371 aaKnown RBP16.4■□□□□ 0.22
COL16A1-206ENST00000461217 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
COL16A1-206ENST00000461217 OAZ2O95190 189 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 PIGRP01833 764 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 GDI1P31150 447 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 ALDH1A3P47895 512 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 ZNF131P52739 623 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 EPHB3P54753 998 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 FOXK2Q01167 660 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 TEAD2Q15562 447 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 JADE1Q6IE81 842 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 VITQ6UXI7 678 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 CD302Q8IX05 232 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 KIAA2013Q8IYS2 634 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 ZSCAN18Q8TBC5 510 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 LARP4BQ92615 738 aaKnown RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 ZSWIM3Q96MP5 696 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 TSPAN18Q96SJ8 248 aa16.39■□□□□ 0.21
COL16A1-206ENST00000461217 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-206ENST00000461217 A0A0B4J269 797 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms