RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ANAPC1Q9H1A4 1944 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 LACTBL1A8MY62 500 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 VNN2O95498 520 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 CPB1P15086 417 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 CYP3A5P20815 502 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 MAGEA9P43362 315 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 ID4P47928 161 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 EPHA5P54756 1037 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 FOXK2Q01167 660 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 FZD5Q13467 585 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 ENOX2Q16206 610 aaKnown RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF528Q3MIS6 628 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 CYP4A22Q5TCH4 519 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 GPBP1Q86WP2 473 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 DNASE1L2Q92874 299 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 AK8Q96MA6 479 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF512Q96ME7 567 aaPredicted RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 ZSWIM3Q96MP5 696 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 NELL2Q99435 816 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 FBXO4Q9UKT5 387 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 TBX20Q9UMR3 447 aa16■□□□□ 0.15
SMPD4-216ENST00000461187 UBQLN1Q9UMX0 589 aaKnown RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 TIMM13Q9Y5L4 95 aaPredicted RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 GTF3C5Q9Y5Q8 519 aaPredicted RBP16■□□□□ 0.15
SMPD4-216ENST00000461187 OGTO15294 1046 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 LAMTOR5O43504 91 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 PIGRP01833 764 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 ADRB2P07550 413 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 RPS9P46781 194 aaKnown RBP15.99■□□□□ 0.15
SMPD4-216ENST00000461187 LIG4P49917 911 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF131P52739 623 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 PPP2R3AQ06190 1150 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 GRM2Q14416 872 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 KYAT1Q16773 422 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 IQCEQ6IPM2 695 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF852Q6ZMS4 543 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 SUMF1Q8NBK3 374 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 GREB1Q4ZG55 1949 aa15.99■□□□□ 0.15
SMPD4-216ENST00000461187 K7ENM7 598 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 PPEF2O14830 753 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 HNRNPDLO14979 420 aaKnown RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 OR4Q2P0C623 313 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 MYL4P12829 197 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 GJA1P17302 382 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 SCP2P22307 547 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 UBA7P41226 1012 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 CSTF1Q05048 431 aaKnown RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 GRIN1Q05586 938 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 DHX8Q14562 1220 aaKnown RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 MCM6Q14566 821 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 SLC39A4Q6P5W5 647 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 VITQ6UXI7 678 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 MAP4K3Q8IVH8 894 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 MYCT1Q8N699 235 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 LEMD2Q8NC56 503 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 SMARCD2Q92925 531 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 PGLYRP2Q96PD5 576 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 TSPAN18Q96SJ8 248 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 FIZ1Q96SL8 496 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 TRMT61BQ9BVS5 477 aaKnown RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 LRRC3Q9BY71 257 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 OXCT2Q9BYC2 517 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 CRISPLD1Q9H336 500 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 BRD9Q9H8M2 597 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 RPF1Q9H9Y2 349 aaKnown RBP15.98■□□□□ 0.15
SMPD4-216ENST00000461187 PARVGQ9HBI0 331 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 ASAH2Q9NR71 780 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 YIPF1Q9Y548 306 aa15.98■□□□□ 0.15
SMPD4-216ENST00000461187 NCANO14594 1321 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 A0A0B4J269 797 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 OR6C75A6NL08 312 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 NCAM2O15394 837 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 XPOTO43592 962 aaKnown RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 KINO60870 393 aaKnown RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 FAM13AO94988 1023 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 PSMC3P17980 439 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 PLCG1P19174 1290 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 VIPR2P41587 438 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 GPR17Q13304 367 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 KARSQ15046 597 aaKnown RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 TEAD2Q15562 447 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 SPATA1Q5VX52 437 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 LARP1BQ659C4 914 aaKnown RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 ERMP1Q7Z2K6 904 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 KIAA2013Q8IYS2 634 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 SHKBP1Q8TBC3 707 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 RUBCNQ92622 972 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 RAD54LQ92698 747 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 BORCS6Q96GS4 357 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 DNAJC25Q9H1X3 360 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 TRPV4Q9HBA0 871 aa15.97■□□□□ 0.15
SMPD4-216ENST00000461187 ZNF334Q9HCZ1 680 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-216ENST00000461187 TRPV5Q9NQA5 729 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms