RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NXPE3Q969Y0 559 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ASIC4Q96FT7 647 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 IKZF4Q9H2S9 585 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 PCIF1Q9H4Z3 704 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 UBQLN1Q9UMX0 589 aaKnown RBP14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 DERAQ9Y315 318 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CLUHO75153 1309 aa14.35□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ZMYND10O75800 440 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CYP3A5P20815 502 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 FGFR3P22607 806 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 NUBP1P53384 320 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 PTPN5P54829 565 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 UVSSAQ2YD98 709 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 NT5DC4Q86YG4 428 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 KIAA0895Q8NCT3 520 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CACTINQ8WUQ7 758 aaKnown RBP14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ZMAT2Q96NC0 199 aaKnown RBP14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CLSTN3Q9BQT9 956 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 CBWD1Q9BRT8 395 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 HSPBP1Q9NZL4 362 aa14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 ZFP37Q9Y6Q3 630 aaPredicted RBP14.34□□□□□ -0.11
RAB11FIP3-207ENST00000461009 H7C4K7 107 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PODXLO00592 558 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PDXKO00764 312 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TGFB1I1O43294 461 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 HOXA9P31269 272 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ELF1P32519 619 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 OR1D2P34982 312 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 RAB33AQ14088 237 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TMEM132DQ14C87 1099 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SURF1Q15526 300 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CRELD2Q6UXH1 353 aaPredicted RBP14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C12orf56Q8IXR9 622 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GUF1Q8N442 669 aaKnown RBP14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 XXYLT1Q8NBI6 393 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 KCNK12Q9HB15 430 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MTRRQ9UBK8 725 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FBXL21Q9UKT6 434 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 BACE2Q9Y5Z0 518 aa14.33□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TECTAO75443 2155 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GOLGA8IPA6NC78 632 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GOLGA8JA6NMD2 632 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SYN3O14994 580 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CLIC2O15247 247 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PAPLNO95428 1278 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C8AP07357 584 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PAX3P23760 479 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 FSHRP23945 695 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 AVPR2P30518 371 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SPAG1Q07617 926 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GET4Q7L5D6 327 aaPredicted RBP14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 APPL2Q8NEU8 664 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SPATA20Q8TB22 786 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZNF707Q96C28 371 aaPredicted RBP14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 GOLGA2P5Q9HBQ8 144 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 EPS15L1Q9UBC2 864 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 POLIQ9UNA4 740 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 C2CD2Q9Y426 696 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CDY1Q9Y6F8 540 aa14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MTCL1Q9Y4B5 1905 aaKnown RBP14.32□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ANK1P16157 1881 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MEFVO15553 781 aaPredicted RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 EXOC3O60645 756 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 RFX1P22670 979 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 RPL13P26373 211 aaKnown RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 TKTP29401 623 aaKnown RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 LRPAP1P30533 357 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MCM4P33991 863 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 CYP2J2P51589 502 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SOX4Q06945 474 aaPredicted RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 STIM1Q13586 685 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MYBPC2Q14324 1141 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 ZNF658Q5TYW1 1059 aaPredicted RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 SPATA1Q5VX52 437 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 RDH13Q8NBN7 331 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 DUSP12Q9UNI6 340 aa14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 R3HCC1Q9Y3T6 440 aaKnown RBP14.31□□□□□ -0.12
RAB11FIP3-207ENST00000461009 MYO10Q9HD67 2058 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 LAMP2P13473 410 aa14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP3-207ENST00000461009 PPP1R2P41236 205 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms