RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RSPO2Q6UXX9 243 aaPredicted RBP22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 ZNF516Q92618 1163 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 ASB2Q96Q27 587 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 BACE2Q9Y5Z0 518 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 TSC2P49815 1807 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 AKAP3O75969 853 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 C1RP00736 705 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 TMEM191BP0C7N4 346 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 TAF6P49848 677 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 MCCD1P59942 119 aaPredicted RBP22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ADAM9Q13443 819 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 AAK1Q2M2I8 961 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 CEP135Q66GS9 1140 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ANKRD40Q6AI12 368 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ANKRD54Q6NXT1 300 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 LILRA6Q6PI73 481 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 SYCE2Q6PIF2 218 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ANKS3Q6ZW76 656 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ZC3H3Q8IXZ2 948 aaKnown RBP22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 CSGALNACT2Q8N6G5 542 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 CASP10Q92851 521 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 DHTKD1Q96HY7 919 aaPredicted RBP22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 ANKRD36BP1Q96IX9 119 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 SENP8Q96LD8 212 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 FNBP1Q96RU3 617 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 AGAP1Q9UPQ3 857 aa22.25■■□□□ 1.15
RPUSD3-210ENST00000460909 MTCL1Q9Y4B5 1905 aaKnown RBP22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 GOLGA6L22H0YM25 854 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 TNNI1P19237 187 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 CCNE1P24864 410 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 RPL13P26373 211 aaKnown RBP22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 GLYCTKQ8IVS8 523 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 LRRC52Q8N7C0 313 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 TRIML1Q8N9V2 468 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 SMRP1Q8NCR6 262 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 APPL2Q8NEU8 664 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 S1PR5Q9H228 398 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 FRMD4BQ9Y2L6 1034 aa22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 TIMM13Q9Y5L4 95 aaPredicted RBP22.24■■□□□ 1.15
RPUSD3-210ENST00000460909 TRIM49BA6NDI0 452 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 LRRIQ3A6PVS8 624 aaPredicted RBP22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 TGM5O43548 720 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 OAZ2O95190 189 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 TNNC2P02585 160 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 BMP1P13497 986 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 TYMPP19971 482 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 PPP1R2P41236 205 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 DLG4P78352 724 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 RBP5P82980 135 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 LRRC63Q05C16 580 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 RAB33AQ14088 237 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 CLUL1Q15846 466 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 C1orf220Q5T0J3 134 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 SLC8B1Q6J4K2 584 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 DSTYKQ6XUX3 929 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 TRAPPC11Q7Z392 1133 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 PALB2Q86YC2 1186 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 TMC2Q8TDI7 906 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 NUP62CLQ9H1M0 184 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 CD207Q9UJ71 328 aa22.23■■□□□ 1.15
RPUSD3-210ENST00000460909 GRXCR2A6NFK2 248 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 KPNA7A9QM74 516 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 PSMA7O14818 248 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 GLUD1P00367 558 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 CYP11A1P05108 521 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 SRGAP2BP0DMP2 458 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 HOXB8P17481 243 aaPredicted RBP22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 OR1D2P34982 312 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 PSMC2P35998 433 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 PNPLA4P41247 253 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 STIM1Q13586 685 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 SV2CQ496J9 727 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 EEF2KMTQ96G04 330 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 ZNF560Q96MR9 790 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 FBXL5Q9UKA1 691 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 CDY1Q9Y6F8 540 aa22.22■■□□□ 1.15
RPUSD3-210ENST00000460909 H7C4K7 107 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 MBTPS2O43462 519 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 CST3P01034 146 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 C4BPAP04003 597 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 KRT19P08727 400 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 ODC1P11926 461 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 YWHAHQ04917 246 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 PTCRAQ6ISU1 281 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 TTI2Q6NXR4 508 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 FOXR2Q6PJQ5 311 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 FAM186BQ8IYM0 893 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 TSG101Q99816 390 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 DUSP9Q99956 384 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 MKNK1Q9BUB5 465 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 DZANK1Q9NVP4 752 aa22.21■■□□□ 1.15
RPUSD3-210ENST00000460909 TCF20Q9UGU0 1960 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 CYB561D2O14569 222 aa22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 CETN3O15182 167 aa22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 SPATA31D3P0C874 917 aa22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 AP3M2P53677 418 aa22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 FKBP3Q00688 224 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 ENPEPQ07075 957 aa22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 SMAD4Q13485 552 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-210ENST00000460909 PUS10Q3MIT2 529 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms