RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SLC1A5Q15758 541 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 RASIP1Q5U651 963 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 ARHGEF19Q8IW93 802 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 BBOF1Q8ND07 529 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 ZNF75CPQ92670 426 aaPredicted RBP16.41■□□□□ 0.22
SSR4-206ENST00000460616 STMN2Q93045 179 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 TUBB6Q9BUF5 446 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 DMAC2Q9NW81 257 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
SSR4-206ENST00000460616 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
SSR4-206ENST00000460616 POC1B-GALNT4F8VUJ3 575 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 BFSP1Q12934 665 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 PKN2Q16513 984 aaKnown RBP16.4■□□□□ 0.22
SSR4-206ENST00000460616 NSMFQ6X4W1 530 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 CFAP57Q96MR6 1250 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 RBM15Q96T37 977 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSR4-206ENST00000460616 DCLK3Q9C098 648 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 AGPAT3Q9NRZ7 376 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 STX18Q9P2W9 335 aaKnown RBP16.4■□□□□ 0.22
SSR4-206ENST00000460616 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 NUMBLQ9Y6R0 609 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 ABHD2P08910 425 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 GCAP28676 217 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSR4-206ENST00000460616 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 ZNF365Q70YC5 407 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 NOP9Q86U38 636 aaKnown RBP16.4■□□□□ 0.22
SSR4-206ENST00000460616 VPS52Q8N1B4 723 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 MCUR1Q96AQ8 359 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 UVRAGQ9P2Y5 699 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 DCTN4Q9UJW0 460 aa16.4■□□□□ 0.22
SSR4-206ENST00000460616 EGFRP00533 1210 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 RHBDL3P58872 404 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 CETN1Q12798 172 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 IZUMO3Q5VZ72 239 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 SCYL3Q8IZE3 742 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ARHGAP18Q8N392 663 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ZNF398Q8TD17 642 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ZNF184Q99676 751 aaPredicted RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 ZNF212Q9UDV6 495 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 TBX3O15119 743 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSR4-206ENST00000460616 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 CACNB3P54284 484 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 GSTA3Q16772 222 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 KCTD1Q719H9 257 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 NSL1Q96IY1 281 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 UBE2OQ9C0C9 1292 aaKnown RBP16.39■□□□□ 0.21
SSR4-206ENST00000460616 PARVGQ9HBI0 331 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ARL8BQ9NVJ2 186 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 ANKFY1Q9P2R3 1169 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
SSR4-206ENST00000460616 DDX60LQ5H9U9 1706 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 FGFR1P11362 822 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 PSMC4P43686 418 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 ZNF720Q7Z2F6 126 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 SDCCAG8Q86SQ7 713 aaPredicted RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 TDRPQ86YL5 185 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 PTCD3Q96EY7 689 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 NR1H4Q96RI1 486 aaPredicted RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 NOCTQ9UK39 431 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 R3HDM2Q9Y2K5 976 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 SH3BP1Q9Y3L3 701 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 NEU2Q9Y3R4 380 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 EMSYQ7Z589 1322 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 HAUS5O94927 633 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 AKR1B1P15121 316 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 DLG4P78352 724 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 LVRNQ6Q4G3 990 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 HHIPL2Q6UWX4 724 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 WDR60Q8WVS4 1066 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 NDNQ99608 321 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 EIF2AK1Q9BQI3 630 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 HERPUD2Q9BSE4 406 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 VCX3BQ9H321 246 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 VCX3AQ9NNX9 186 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 SAYSD1Q9NPB0 183 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms