RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 A0A1W2PQJ5 194 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 NRP1O14786 923 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 HUS1O60921 280 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 GALTP07902 379 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 UCHL3P15374 230 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 KLK7P49862 253 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 BCAR1P56945 870 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 LILRA4P59901 499 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 TATDN2Q93075 761 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 CWH43Q9H720 699 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 CYP3A43Q9HB55 503 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 GDAP2Q9NXN4 497 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 DNAJB4Q9UDY4 337 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
ZNF3-211ENST00000460331 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
ZNF3-211ENST00000460331 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
ZNF3-211ENST00000460331 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
ZNF3-211ENST00000460331 PPEF2O14830 753 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 PPM1AP35813 382 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 SLC11A1P49279 550 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 CUL2Q13617 745 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 SPOPLQ6IQ16 392 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 KCNT2Q6UVM3 1135 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
ZNF3-211ENST00000460331 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 GANQ9H2C0 597 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.37□□□□□ -0.27
ZNF3-211ENST00000460331 STK39Q9UEW8 545 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 ADAM28Q9UKQ2 775 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 DSEQ9UL01 958 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 PRG3Q9Y2Y8 225 aaPredicted RBP13.37□□□□□ -0.27
ZNF3-211ENST00000460331 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 SNX9Q9Y5X1 595 aa13.37□□□□□ -0.27
ZNF3-211ENST00000460331 FNDC1Q4ZHG4 1894 aaPredicted RBP13.36□□□□□ -0.27
ZNF3-211ENST00000460331 AKR1B15C9JRZ8 316 aaPredicted RBP13.36□□□□□ -0.27
ZNF3-211ENST00000460331 CYB561D2O14569 222 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 LRRN2O75325 713 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 NOL4O94818 638 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 ODC1P11926 461 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 STAT1P42224 750 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 ZBED6P86452 979 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 ARHGAP44Q17R89 818 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 DPY19L2P1Q6NXN4 242 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 CNGA4Q8IV77 575 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 TOP6BLQ8N6T0 577 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 CPLX3Q8WVH0 158 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 SENP8Q96LD8 212 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 BCO2Q9BYV7 579 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 APOBEC3GQ9HC16 384 aaKnown RBP13.36□□□□□ -0.27
ZNF3-211ENST00000460331 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 PCDHA11Q9Y5I1 949 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 FHOD1Q9Y613 1164 aa13.36□□□□□ -0.27
ZNF3-211ENST00000460331 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
ZNF3-211ENST00000460331 SPTLC1O15269 473 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TACC1O75410 805 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 KIF4AO95239 1232 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 CASP14P31944 242 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZNF3-211ENST00000460331 GSDMDP57764 484 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 KRT17Q04695 432 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TBX2Q13207 712 aaPredicted RBP13.35□□□□□ -0.27
ZNF3-211ENST00000460331 DRAP1Q14919 205 aaPredicted RBP13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TIGD5Q53EQ6 642 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 GJB7Q6PEY0 223 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TDHQ8IZJ6 230 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TMEM86AQ8N2M4 240 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 COLGALT1Q8NBJ5 622 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 SAMD11Q96NU1 681 aa13.35□□□□□ -0.27
ZNF3-211ENST00000460331 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms