RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MIS12Q9H081 205 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 WDR35Q9P2L0 1181 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 SHOC2Q9UQ13 582 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
HDAC3-202ENST00000459727 PHIPQ8WWQ0 1821 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 LOC285556D6RIA3 1793 aa9.39□□□□□ -0.91
HDAC3-202ENST00000459727 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 LRRIQ4A6NIV6 560 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 ADCY3O60266 1144 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 TOM1L1O75674 476 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 RALAP11233 206 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 TSHRP16473 764 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 ACO1P21399 889 aaKnown RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 KCNA3P22001 575 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 MMP8P22894 467 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 HNRNPH1P31943 449 aaKnown RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 CDH5P33151 784 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 SLC26A2P50443 739 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 ZNF132P52740 706 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 ITGA8P53708 1063 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 MAMLD1Q13495 774 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 NCOA4Q13772 614 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 TFDP1Q14186 410 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 MORF4L2Q15014 288 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 CNGA2Q16280 664 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 SH3D19Q5HYK7 790 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 IER5Q5VY09 327 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 CATSPERGQ6ZRH7 1159 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 GSTA5Q7RTV2 222 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 TTC39CQ8N584 583 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 FNIP1Q8TF40 1166 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 CCT6BQ92526 530 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 WRNIP1Q96S55 665 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 KIFC3Q9BVG8 833 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 NIF3L1Q9GZT8 377 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 TOPORSQ9NS56 1045 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 SMG5Q9UPR3 1016 aaKnown RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-202ENST00000459727 SIP14410 1827 aa9.38□□□□□ -0.91
HDAC3-202ENST00000459727 UMODL1Q5DID0 1318 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 ADGRA2Q96PE1 1338 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 GSTTP1A0A1W2PQM5 241 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM150BA6NC51 233 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 RASSF9O75901 435 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 ASS1P00966 412 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 VIMP08670 466 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 KRT7P08729 469 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 DESP17661 470 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 GLRA2P23416 452 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 PHBP35232 272 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 SCTRP47872 440 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 MNAT1P51948 309 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 GSCP56915 257 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 IL9RQ01113 521 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 ACAP1Q15027 740 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 SNCBQ16143 134 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 HADHQ16836 314 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 DUOXA2Q1HG44 320 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 IZUMO3Q5VZ72 239 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 AADACL2Q6P093 401 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 CENPUQ71F23 418 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 EPS8L3Q8TE67 593 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 C1orf54Q8WWF1 131 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 NKD2Q969F2 451 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 NCAPGQ9BPX3 1015 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 C11orf70Q9BRQ4 267 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 TRIM7Q9C029 511 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 CCDC113Q9H0I3 377 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 ADAM7Q9H2U9 754 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 YY1AP1Q9H869 796 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 PCDH9Q9HC56 1237 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 SSU72Q9NP77 194 aaKnown RBP9.37□□□□□ -0.91
HDAC3-202ENST00000459727 KLC4Q9NSK0 619 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 HAUS2Q9NVX0 235 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 SLC12A4Q9UP95 1085 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 NEU2Q9Y3R4 380 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 CD2APQ9Y5K6 639 aa9.37□□□□□ -0.91
HDAC3-202ENST00000459727 PARP14Q460N5 1801 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms