RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 POLIQ9UNA4 740 aa26.14■■□□□ 1.78
U2AF1-204ENST00000459639 MMEP08473 750 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 GZMAP12544 262 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 GLRA4Q5JXX5 417 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 SCARA5Q6ZMJ2 495 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 CTU1Q7Z7A3 348 aaKnown RBP26.13■■□□□ 1.77
U2AF1-204ENST00000459639 PALB2Q86YC2 1186 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 FAM126BQ8IXS8 530 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 LRRC52Q8N7C0 313 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 FAM124BQ9H5Z6 455 aaPredicted RBP26.13■■□□□ 1.77
U2AF1-204ENST00000459639 CYP3A43Q9HB55 503 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 SCN1AP35498 2009 aa26.13■■□□□ 1.77
U2AF1-204ENST00000459639 CD4P01730 458 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 ITGA4P13612 1032 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 CYP3A5P20815 502 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 MYO1EQ12965 1108 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 TRIM58Q8NG06 486 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 TACC1O75410 805 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 GNA15P30679 374 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 MRPL10Q7Z7H8 261 aaKnown RBP26.12■■□□□ 1.77
U2AF1-204ENST00000459639 C18orf25Q96B23 403 aaPredicted RBP26.12■■□□□ 1.77
U2AF1-204ENST00000459639 PCDHB18PQ96TA0 734 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 ISCUQ9H1K1 167 aa26.12■■□□□ 1.77
U2AF1-204ENST00000459639 MYH10P35580 1976 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 A0A0A6YYK5 440 aaPredicted RBP26.11■■□□□ 1.77
U2AF1-204ENST00000459639 TLR3O15455 904 aaKnown RBP26.11■■□□□ 1.77
U2AF1-204ENST00000459639 ZNF623O75123 536 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 WEE2P0C1S8 567 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 TMEM253P0C7T8 217 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 CD58P19256 250 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 GALCP54803 685 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 FBXO46Q6PJ61 603 aaPredicted RBP26.11■■□□□ 1.77
U2AF1-204ENST00000459639 NOX5Q96PH1 765 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 ALS2CR12Q96Q35 445 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 CRISPLD2Q9H0B8 497 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 TAS2R14Q9NYV8 317 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 SALL4Q9UJQ4 1053 aa26.11■■□□□ 1.77
U2AF1-204ENST00000459639 ANO9A1A5B4 782 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 CTAGE9A4FU28 777 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 MGEA5O60502 916 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 RTN2O75298 545 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 SKIP12755 728 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 TNNC1P63316 161 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 C9orf57Q5W0N0 161 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 NAPGQ99747 312 aaPredicted RBP26.1■■□□□ 1.77
U2AF1-204ENST00000459639 GIT1Q9Y2X7 761 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.1■■□□□ 1.77
U2AF1-204ENST00000459639 CAPN6Q9Y6Q1 641 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 NCANO14594 1321 aa26.1■■□□□ 1.77
U2AF1-204ENST00000459639 ANKRD62A6NC57 917 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 TMCO5BA8MYB1 307 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 MOCS3O95396 460 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 HSPA8P11142 646 aaKnown RBP26.09■■□□□ 1.77
U2AF1-204ENST00000459639 BFSP2Q13515 415 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 TRIM72Q6ZMU5 477 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 TTC39CQ8N584 583 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 CTNNBL1Q8WYA6 563 aaPredicted RBP26.09■■□□□ 1.77
U2AF1-204ENST00000459639 ZNF333Q96JL9 665 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 SMYD3Q9H7B4 428 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 TANC1Q9C0D5 1861 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 A0A0U1RQF3 1178 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 PTGESO14684 152 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 SELPP16109 830 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 ATF7P17544 494 aaPredicted RBP26.09■■□□□ 1.77
U2AF1-204ENST00000459639 MBTPS1Q14703 1052 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 LRRC8DQ7L1W4 858 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 ZNF560Q96MR9 790 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 PPP1R10Q96QC0 940 aaKnown RBP26.09■■□□□ 1.77
U2AF1-204ENST00000459639 ADAM2Q99965 735 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 SDCBP2Q9H190 292 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 SLC38A7Q9NVC3 462 aa26.09■■□□□ 1.77
U2AF1-204ENST00000459639 PNPLA4P41247 253 aa26.08■■□□□ 1.77
U2AF1-204ENST00000459639 IFI16Q16666 785 aaKnown RBP26.08■■□□□ 1.77
U2AF1-204ENST00000459639 CLEC16AQ2KHT3 1053 aa26.08■■□□□ 1.77
U2AF1-204ENST00000459639 DNAAF5Q86Y56 855 aa26.08■■□□□ 1.77
U2AF1-204ENST00000459639 L2HGDHQ9H9P8 463 aa26.08■■□□□ 1.77
U2AF1-204ENST00000459639 PIRO00625 290 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 THAP12O43422 761 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 CALCAP01258 141 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 FTLP02792 175 aaPredicted RBP26.07■■□□□ 1.76
U2AF1-204ENST00000459639 RAP1GAPP47736 663 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 PGBD4Q96DM1 585 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 RPS6KC1Q96S38 1066 aa26.07■■□□□ 1.76
U2AF1-204ENST00000459639 MEIS3P2A8K0S8 358 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 PPEF2O14830 753 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 BUB1O43683 1085 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 CILPO75339 1184 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 URI1O94763 535 aaPredicted RBP26.06■■□□□ 1.76
U2AF1-204ENST00000459639 PAEPP09466 180 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 LRPAP1P30533 357 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 MLH1P40692 756 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 NAP1L1P55209 391 aaKnown RBP26.06■■□□□ 1.76
U2AF1-204ENST00000459639 INCA1Q0VD86 236 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 ACAD10Q6JQN1 1059 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 AGMOQ6ZNB7 445 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 RFFLQ8WZ73 363 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 ZFP42Q96MM3 310 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 RNF19AQ9NV58 838 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 PCDHGC5Q9Y5F6 944 aa26.06■■□□□ 1.76
U2AF1-204ENST00000459639 TDRD15B5MCY1 1934 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms