RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 LMO3Q8TAP4 145 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 PLEKHO2Q8TD55 490 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DNAJB3Q8WWF6 145 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DHX38Q92620 1227 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 TSPAN18Q96SJ8 248 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 DESI2Q9BSY9 194 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 IFIH1Q9BYX4 1025 aaKnown RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 NKX2-4Q9H2Z4 354 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 ADAMTS10Q9H324 1103 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 PDZD7Q9H5P4 517 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 ASB7Q9H672 318 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 PDE11AQ9HCR9 933 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 ARHGAP20Q9P2F6 1191 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 HCN4Q9Y3Q4 1203 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
VPS50-207ENST00000458530 TRPV2Q9Y5S1 764 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 GBF1Q92538 1859 aa9.62□□□□□ -0.87
VPS50-207ENST00000458530 A0A0U1RQG5 324 aaPredicted RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 USP27XA6NNY8 438 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 RBAK-RBAKDNI3L0D1 243 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 TREHO43280 583 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 B4GALT5O43286 388 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 FAM189A1O60320 539 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 CAND2O75155 1236 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 LCA5LO95447 670 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 EDN1P05305 212 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ACRP10323 421 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 IGFBP4P22692 258 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 GRM5P41594 1212 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 VAV2P52735 878 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 BPIFB4P59827 614 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ETF1P62495 437 aaKnown RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 ARID5AQ03989 594 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 TRPC3Q13507 836 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 SLC18A3Q16572 532 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 TMEM31Q5JXX7 168 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 RUFY4Q6ZNE9 571 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 C15orf39Q6ZRI6 1047 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 RPAINQ86UA6 219 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 REXO1L1PQ8IX06 675 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 THNSL1Q8IYQ7 743 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 HACE1Q8IYU2 909 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 TAF4BQ92750 862 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ZBTB10Q96DT7 871 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 FAXDC2Q96IV6 333 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 GLT1D1Q96MS3 346 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 PPP1R16BQ96T49 567 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 OSMRQ99650 979 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 HAPLN2Q9GZV7 340 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 SLC28A3Q9HAS3 691 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 PLEKHA5Q9HAU0 1116 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
VPS50-207ENST00000458530 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 GINS2Q9Y248 185 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 DERAQ9Y315 318 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 MTCH2Q9Y6C9 303 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 MYH10P35580 1976 aa9.61□□□□□ -0.87
VPS50-207ENST00000458530 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 C4BPAP04003 597 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 STAG3L1P0CL83 205 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 P4HA1P13674 534 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 PDE6CP51160 858 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 NCOA4Q13772 614 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 IFI16Q16666 785 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 ARHGAP44Q17R89 818 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 CCDC122Q5T0U0 273 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 TDRD10Q5VZ19 366 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 EEF1DP3Q658K8 133 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 HGSNATQ68CP4 663 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 PPP1R2P3Q6NXS1 205 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 SERINC5Q86VE9 423 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 TAS1R2Q8TE23 839 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 SHC3Q92529 594 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 CPB2Q96IY4 423 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 ALS2CR12Q96Q35 445 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 POP1Q99575 1024 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.6□□□□□ -0.87
VPS50-207ENST00000458530 CELF4Q9BZC1 486 aaKnown RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 FAM124BQ9H5Z6 455 aaPredicted RBP9.6□□□□□ -0.87
VPS50-207ENST00000458530 LZTFL1Q9NQ48 299 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 INTUQ9ULD6 942 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 PCDHA11Q9Y5I1 949 aa9.6□□□□□ -0.87
VPS50-207ENST00000458530 PI4K2BG5E9Z4 385 aa9.59□□□□□ -0.87
VPS50-207ENST00000458530 SMAPO00193 183 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms