RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 ADAM17P78536 824 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 IRF5Q13568 498 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 CCDC70Q6NSX1 233 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 TRPV1Q8NER1 839 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 CD101Q93033 1021 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 UVRAGQ9P2Y5 699 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 MYADML2A6NDP7 307 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 HAS3O00219 553 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 TREHO43280 583 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 RAD51CO43502 376 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 FGGP02679 453 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 NSFP46459 744 aaKnown RBP17.46■□□□□ 0.39
CAPN13-203ENST00000458085 CDH8P55286 799 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 DNAJB3Q8WWF6 145 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
CAPN13-203ENST00000458085 SDCBP2Q9H190 292 aa17.46■□□□□ 0.39
CAPN13-203ENST00000458085 ABT1Q9ULW3 272 aaKnown RBP17.46■□□□□ 0.39
CAPN13-203ENST00000458085 ESYT3A0FGR9 886 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 PEX5P50542 639 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 CASP8Q14790 479 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 TRADDQ15628 312 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 ADAT2Q7Z6V5 191 aaKnown RBP17.45■□□□□ 0.38
CAPN13-203ENST00000458085 SOCS4Q8WXH5 440 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 TFAP2BQ92481 460 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 RPS6KC1Q96S38 1066 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 DDX47Q9H0S4 455 aaKnown RBP17.45■□□□□ 0.38
CAPN13-203ENST00000458085 CARD9Q9H257 536 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 ANAPC7Q9UJX3 599 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 KRIT1O00522 736 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 HEXIM1O94992 359 aaKnown RBP17.45■□□□□ 0.38
CAPN13-203ENST00000458085 NPTXRO95502 500 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 MCM3P25205 808 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 PTP4A2Q12974 167 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 WDR72Q3MJ13 1102 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 MMS22LQ6ZRQ5 1243 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 HDXQ7Z353 690 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 TMEM40Q8WWA1 233 aa17.45■□□□□ 0.38
CAPN13-203ENST00000458085 EIF2AQ9BY44 585 aaKnown RBP17.45■□□□□ 0.38
CAPN13-203ENST00000458085 SMIM35A0A1B0GVV1 85 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 GJB6O95452 261 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 CPT1AP50416 773 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 ORC1Q13415 861 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 GLE1Q53GS7 698 aaKnown RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 CALR3Q96L12 384 aaKnown RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 ACAP3Q96P50 834 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 GCOM2Q9BZD3 368 aaPredicted RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 AP5M1Q9H0R1 490 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 ASB7Q9H672 318 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 SMYD3Q9H7B4 428 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 AVENQ9NQS1 362 aaPredicted RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 TTC7AQ9ULT0 858 aaPredicted RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 GABRQQ9UN88 632 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 HES2Q9Y543 173 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 TNNC1P63316 161 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 GUCY2DQ02846 1103 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 SREBF2Q12772 1141 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 TRIM72Q6ZMU5 477 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 CATSPER4Q7RTX7 472 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 AENQ8WTP8 325 aaKnown RBP17.44■□□□□ 0.38
CAPN13-203ENST00000458085 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 ERVK-5Q9HDB9 667 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 ADAM22Q9P0K1 906 aa17.44■□□□□ 0.38
CAPN13-203ENST00000458085 MIF4GDA9UHW6 222 aaKnown RBP17.43■□□□□ 0.38
CAPN13-203ENST00000458085 SPOPO43791 374 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 DARSP14868 501 aaKnown RBP17.43■□□□□ 0.38
CAPN13-203ENST00000458085 POLR2BP30876 1174 aaKnown RBP17.43■□□□□ 0.38
CAPN13-203ENST00000458085 CAP1Q01518 475 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 TMEM132DQ14C87 1099 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 FSCN1Q16658 493 aaKnown RBP17.43■□□□□ 0.38
CAPN13-203ENST00000458085 ZNF667Q5HYK9 610 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 PHF13Q86YI8 300 aaPredicted RBP17.43■□□□□ 0.38
CAPN13-203ENST00000458085 ADPGKQ9BRR6 497 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 BCO2Q9BYV7 579 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 EPB41L5Q9HCM4 733 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 SNTG2Q9NY99 539 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 HMGXB4Q9UGU5 601 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 BRCA2P51587 3418 aa17.43■□□□□ 0.38
CAPN13-203ENST00000458085 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
CAPN13-203ENST00000458085 GRM5P41594 1212 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 TM4SF4P48230 202 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
CAPN13-203ENST00000458085 C1orf131Q8NDD1 294 aaKnown RBP17.42■□□□□ 0.38
CAPN13-203ENST00000458085 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 TWNKQ96RR1 684 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 CA12O43570 354 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 MYBL1P10243 752 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 PYGMP11217 842 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
CAPN13-203ENST00000458085 PURAQ00577 322 aaKnown RBP17.42■□□□□ 0.38
CAPN13-203ENST00000458085 ZDHHC14Q8IZN3 488 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 UBL4BQ8N7F7 174 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 WHAMMQ8TF30 809 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 CASKIN2Q8WXE0 1202 aa17.42■□□□□ 0.38
CAPN13-203ENST00000458085 TRIB2Q92519 343 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms