RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SGSM1Q2NKQ1 1148 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 MPZL3Q6UWV2 235 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 RHPN2Q8IUC4 686 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 SHCBP1Q8NEM2 672 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-202ENST00000457422 BCAS4Q8TDM0 211 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 ZC3H15Q8WU90 426 aaKnown RBP17.75■□□□□ 0.43
CCDC43-202ENST00000457422 NIF3L1Q9GZT8 377 aa17.75■□□□□ 0.43
CCDC43-202ENST00000457422 HBP1O60381 514 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 LSM8O95777 96 aaKnown RBP17.74■□□□□ 0.43
CCDC43-202ENST00000457422 HOXC6P09630 235 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 MMP8P22894 467 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 KCNJ1P48048 391 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 MYL6P60660 151 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 DAB2IPQ5VWQ8 1189 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 SYDE1Q6ZW31 735 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-202ENST00000457422 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-202ENST00000457422 SRLQ86TD4 932 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 RHOT1Q8IXI2 618 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 ZBTB10Q96DT7 871 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 PDGFCQ9NRA1 345 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 PTPN22Q9Y2R2 807 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 MGAMO43451 1857 aa17.74■□□□□ 0.43
CCDC43-202ENST00000457422 ASAP2O43150 1006 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 B4GALT4O60513 344 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
CCDC43-202ENST00000457422 LSP1P33241 339 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 MDH1P40925 334 aaKnown RBP17.73■□□□□ 0.43
CCDC43-202ENST00000457422 TTLL4Q14679 1199 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 KRT71Q3SY84 523 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 KATNAL2Q8IYT4 538 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 NLRP4Q96MN2 994 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 NFKBIZQ9BYH8 718 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 PARVAQ9NVD7 372 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 RSPH14Q9UHP6 348 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 GJA5P36382 358 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 KLF1Q13351 362 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-202ENST00000457422 SLMAPQ14BN4 828 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 ATF7IP2Q5U623 682 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 HOOK3Q86VS8 718 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 FEZF2Q8TBJ5 459 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 HERPUD2Q9BSE4 406 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 WHRNQ9P202 907 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 LCMT1Q9UIC8 334 aa17.73■□□□□ 0.43
CCDC43-202ENST00000457422 ASB14A6NK59 587 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 TULP2O00295 520 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
CCDC43-202ENST00000457422 B4GALT5O43286 388 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 CALB1P05937 261 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 CD58P19256 250 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 CLCN3P51790 818 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 GUCY1A3Q02108 690 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 IFFO1Q0D2I5 559 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 DENND2CQ68D51 928 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 C1orf54Q8WWF1 131 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 RNF25Q96BH1 459 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-202ENST00000457422 TLCD1Q96CP7 247 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-202ENST00000457422 DCLK3Q9C098 648 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 ZNF518BQ9C0D4 1074 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 LRRC4CQ9HCJ2 640 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 HOMER3Q9NSC5 361 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 CISHQ9NSE2 258 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 FEZ2Q9UHY8 353 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-202ENST00000457422 EVPLQ92817 2033 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 PLXNA1Q9UIW2 1896 aa17.72■□□□□ 0.43
CCDC43-202ENST00000457422 INO80B-WBP1J3KQ70 363 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 O00370 1275 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 GJB6O95452 261 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 RARGP13631 454 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 CDH5P33151 784 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 MBTD1Q05BQ5 628 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TRPC3Q13507 836 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 PPP1R7Q15435 360 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 ZNF568Q3ZCX4 644 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 EEF1DP3Q658K8 133 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 THNSL1Q8IYQ7 743 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 GRK7Q8WTQ7 553 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 INO80BQ9C086 356 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 XYLT2Q9H1B5 865 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 RABEP2Q9H5N1 569 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 EFCC1Q9HA90 598 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 CHST7Q9NS84 486 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 IP6K2Q9UHH9 426 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 PCDHGC3Q9UN70 934 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TNFSF13BQ9Y275 285 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 RRP15Q9Y3B9 282 aaKnown RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TCRBV5S1A1TA0A578 114 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TMEM191BP0C7N4 346 aa17.71■□□□□ 0.43
CCDC43-202ENST00000457422 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.437e-9■■■■■ 29.6
CCDC43-202ENST00000457422 BRD2P25440 801 aaKnown RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 HPDP32754 393 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-202ENST00000457422 TAS2R40P59535 323 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms