RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 CDK16Q00536 496 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 CCDC62Q6P9F0 684 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 TGFBRAP1Q8WUH2 860 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 SNRNP27Q8WVK2 155 aaKnown RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 MKL1Q969V6 931 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 ZNF653Q96CK0 615 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 BTBD6Q96KE9 485 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 ZDHHC7Q9NXF8 308 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 CHORDC1Q9UHD1 332 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 EML1O00423 815 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 ATMINO43313 823 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 E2F6O75461 281 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 SNHG28P0DPA3 235 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 ESRRAP11474 423 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 AMPD1P23109 780 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 PGM1P36871 562 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 MAP3K10Q02779 954 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 MOXD1Q6UVY6 613 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 TUBGCP4Q9UGJ1 667 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 SLC24A2Q9UI40 661 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 DCTN4Q9UJW0 460 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 FRMD4BQ9Y2L6 1034 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 UBE4BO95155 1302 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 PPP1R11O60927 126 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 TGDSO95455 350 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 TRIM49P0CI25 452 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 TRIM49CP0CI26 452 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 FUT4P22083 530 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 PPP2R5CQ13362 524 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 GRM2Q14416 872 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 ZNF746Q6NUN9 644 aaPredicted RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 SPATA24Q86W54 205 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 C17orf50Q8WW18 174 aa14.91□□□□□ -0.02
TOP3B-214ENST00000457270 NOCTQ9UK39 431 aaKnown RBP14.91□□□□□ -0.02
TOP3B-214ENST00000457270 VAV1P15498 845 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 ARFIP2P53365 341 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 CDC16Q13042 620 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
TOP3B-214ENST00000457270 TBC1D9BQ66K14 1250 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 CCDC174Q6PII3 467 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 SLC35B4Q969S0 331 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 HAUS1Q96CS2 278 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 AGBL1Q96MI9 1066 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 JMJD4Q9H9V9 463 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 GPAMQ9HCL2 828 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 UBE2TQ9NPD8 197 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-214ENST00000457270 NDE1Q9NXR1 346 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 MEIS1O00470 390 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 RNASEH1O60930 286 aaKnown RBP14.9□□□□□ -0.02
TOP3B-214ENST00000457270 ATF3P18847 181 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 SERPINB3P29508 390 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 ADSSP30520 456 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 AP2B1P63010 937 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 TMED1Q13445 227 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 ITGA9Q13797 1035 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 ADGRG6Q86SQ4 1221 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 SMYD1Q8NB12 490 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 IRGQQ8WZA9 623 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 VPS11Q9H270 941 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 PCDH18Q9HCL0 1135 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 HSFX1Q9UBD0 423 aa14.9□□□□□ -0.02
TOP3B-214ENST00000457270 TAF1P21675 1872 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 A6NJR5 290 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 BTBD19C9JJ37 291 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 POC1B-GALNT4F8VUJ3 575 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 TBX3O15119 743 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 GSTO1P78417 241 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 CCNG2Q16589 344 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 KCTD17Q8N5Z5 321 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 ETNPPLQ8TBG4 499 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 CCDC110Q8TBZ0 833 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 EPS8L1Q8TE68 723 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 PPP1R14BQ96C90 147 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 MPP4Q96JB8 637 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 KCNK13Q9HB14 408 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 TFCP2L1Q9NZI6 479 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 SPATA7Q9P0W8 599 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
TOP3B-214ENST00000457270 SH3GLB1Q9Y371 365 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 ATRNL1Q5VV63 1379 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 A0A0G2JND7 137 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 A0A0J9YVX5 310 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 F5H6K3 240 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 TM9SF1O15321 606 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 KLRC2P26717 231 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 VPS41P49754 854 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 BFSP1Q12934 665 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
TOP3B-214ENST00000457270 CCDC92Q53HC0 331 aaPredicted RBP14.89□□□□□ -0.03
TOP3B-214ENST00000457270 PCNX4Q63HM2 1172 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 PHLDB2Q86SQ0 1253 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 ZNF554Q86TJ5 538 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 TMPRSS6Q8IU80 811 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 HERPUD2Q9BSE4 406 aa14.89□□□□□ -0.03
TOP3B-214ENST00000457270 MAK16Q9BXY0 300 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms