RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 IQCB1Q15051 598 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 PTPN14Q15678 1187 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 RSPO2Q6UXX9 243 aaPredicted RBP15.15■□□□□ 0.02
TIMP1-205ENST00000456754 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 MICAL1Q8TDZ2 1067 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 HPDLQ96IR7 371 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 SUSD3Q96L08 255 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 SENP8Q96LD8 212 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 THAP9Q9H5L6 903 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 CBX8Q9HC52 389 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 LZTS1Q9Y250 596 aa15.15■□□□□ 0.02
TIMP1-205ENST00000456754 SF3B1O75533 1304 aaKnown RBP eCLIP15.15■□□□□ 0.02
TIMP1-205ENST00000456754 KCNJ18B7U540 433 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 PER2O15055 1255 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 LILRB3O75022 631 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CXCL14O95715 111 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CTSAP10619 480 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 ATP1A3P13637 1013 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 FGFR3P22607 806 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 TAF6P49848 677 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 ZNF165P49910 485 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 MYL5Q02045 173 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 NCOA4Q13772 614 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 KCNJ12Q14500 433 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CCDC85BQ15834 202 aaPredicted RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CT47A1Q5JQC4 288 aaPredicted RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CDKAL1Q5VV42 579 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 KIAA0319Q5VV43 1072 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 DSTYKQ6XUX3 929 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 TMC7Q7Z402 723 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 RBM23Q86U06 439 aaKnown RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 LUZP1Q86V48 1076 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 RIN2Q8WYP3 895 aaPredicted RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 APOBEC3GQ9HC16 384 aaKnown RBP15.14■□□□□ 0.01
TIMP1-205ENST00000456754 TMEM8AQ9HCN3 771 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 CHST7Q9NS84 486 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 REV3LO60673 3130 aa15.14■□□□□ 0.01
TIMP1-205ENST00000456754 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-205ENST00000456754 C2orf71A6NGG8 1288 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 KPNA7A9QM74 516 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 M0QZQ0 153 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 IKBKBO14920 756 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 PIK3CAP42336 1068 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 FMO5P49326 533 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 GLUD2P49448 558 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 MXI1P50539 228 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 APBA1Q02410 837 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 DSG1Q02413 1049 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 UBE3AQ05086 875 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 TCEAL5Q5H9L2 206 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
TIMP1-205ENST00000456754 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 LRRC52Q8N7C0 313 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 LNX1Q8TBB1 728 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-205ENST00000456754 FEZF2Q8TBJ5 459 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 SDCBP2Q9H190 292 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 METTL14Q9HCE5 456 aaKnown RBP15.13■□□□□ 0.01
TIMP1-205ENST00000456754 TAB2Q9NYJ8 693 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 PUF60Q9UHX1 559 aaKnown RBP15.13■□□□□ 0.01
TIMP1-205ENST00000456754 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 L1RE1Q9UN81 338 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 NME7Q9Y5B8 376 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
TIMP1-205ENST00000456754 CYB561D2O14569 222 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 FGFR1OPO95684 399 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 GNA14O95837 355 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 URODP06132 367 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 CNPP09543 421 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 FOSL2P15408 326 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 ZNF18P17022 549 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 MYL7Q01449 175 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 LRMPQ12912 555 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 TRPC3Q13507 836 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 KRT31Q15323 416 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 PTPN21Q16825 1174 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 CCDC142Q17RM4 750 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 ZNF699Q32M78 642 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 USP41Q3LFD5 358 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 SV2CQ496J9 727 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 TCP11X2Q5H9J9 407 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 KRT39Q6A163 491 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 MRPL43Q8N983 215 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 VN1R2Q8NFZ6 395 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 TATDN2Q93075 761 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 ZNF560Q96MR9 790 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 GAS2L1Q99501 681 aaPredicted RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 BPIFA3Q9BQP9 254 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 RTP3Q9BQQ7 232 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms