RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 FAM118BQ9BPY3 351 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 GORASP1Q9BQQ3 440 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 CBWD1Q9BRT8 395 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 TRIM55Q9BYV6 548 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 OSBPL8Q9BZF1 889 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 SSU72Q9NP77 194 aaKnown RBP14.51□□□□□ -0.09
PTPRE-204ENST00000455661 AVENQ9NQS1 362 aaPredicted RBP14.51□□□□□ -0.09
PTPRE-204ENST00000455661 HSPBP1Q9NZL4 362 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 NYAP2Q9P242 653 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 PSMC3IPQ9P2W1 217 aaPredicted RBP14.51□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF212Q9UDV6 495 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 DNALI1O14645 258 aaPredicted RBP14.5□□□□□ -0.09
PTPRE-204ENST00000455661 SSR1P43307 286 aaKnown RBP14.5□□□□□ -0.09
PTPRE-204ENST00000455661 LAMB3Q13751 1172 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 ACSBG2Q5FVE4 666 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 SLC30A10Q6XR72 485 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 RHOT1Q8IXI2 618 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 ARHGAP24Q8N264 748 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 TMEM174Q8WUU8 243 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 NRG4Q8WWG1 115 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 RPGRQ92834 1020 aaKnown RBP14.5□□□□□ -0.09
PTPRE-204ENST00000455661 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
PTPRE-204ENST00000455661 NT5C1BQ96P26 610 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 TIPINQ9BVW5 301 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 STX18Q9P2W9 335 aaKnown RBP14.5□□□□□ -0.09
PTPRE-204ENST00000455661 HEY2Q9UBP5 337 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 PSTPIP1O43586 416 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 TJP3O95049 919 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 KRT4P19013 534 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 GTF2IP78347 998 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 ZBTB16Q05516 673 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 RASA2Q15283 850 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 GSTA3Q16772 222 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 CCDC62Q6P9F0 684 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 SESTD1Q86VW0 696 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 SCYL3Q8IZE3 742 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 ARHGAP18Q8N392 663 aa14.5□□□□□ -0.09
PTPRE-204ENST00000455661 A0A0G2JND7 137 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 A0A1W2PPM1 405 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 TISP43B9A030 160 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 NDC80O14777 642 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 RNF8O76064 485 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MAPTP10636 758 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 KRT5P13647 590 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ADSSP30520 456 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ARFIP2P53365 341 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MAPK6Q16659 721 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 KRT39Q6A163 491 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 CAPN12Q6ZSI9 719 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MCOLN2Q8IZK6 566 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 DDX1Q92499 740 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 PTCD3Q96EY7 689 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 WDR18Q9BV38 432 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 WDR11Q9BZH6 1224 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MMADHCQ9H3L0 296 aaPredicted RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ARL8BQ9NVJ2 186 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MTO1Q9Y2Z2 717 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 TAF1LQ8IZX4 1826 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 A8MXQ7 604 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ZBED4O75132 1171 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 TBX10O75333 385 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 PROSCO94903 275 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 PLEKHG4Q58EX7 1191 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 HP1BP3Q5SSJ5 553 aaPredicted RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 RC3H1Q5TC82 1133 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 DAB2IPQ5VWQ8 1189 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 CENPUQ71F23 418 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 RFWD2Q8NHY2 731 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 PLEKHO2Q8TD55 490 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 SEMA4DQ92854 862 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 GATA6Q92908 595 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF184Q99676 751 aaPredicted RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 MAK16Q9BXY0 300 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 METTL5Q9NRN9 209 aaKnown RBP14.49□□□□□ -0.09
PTPRE-204ENST00000455661 ANGPTL2Q9UKU9 493 aa14.49□□□□□ -0.09
PTPRE-204ENST00000455661 WDR91A4D1P6 747 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 GNPATO15228 680 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 FDX1P10109 184 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 ESRRAP11474 423 aaPredicted RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 SNRPFP62306 86 aaKnown RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 ZBED8Q8IZ13 594 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 DAW1Q8N136 415 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 PDCD7Q8N8D1 485 aaKnown RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 DRAXINQ8NBI3 349 aaPredicted RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 DTX3LQ8TDB6 740 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 HELQQ8TDG4 1101 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 DTNBP1Q96EV8 351 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 NR1H4Q96RI1 486 aaPredicted RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 LXNQ9BS40 222 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 MANSC1Q9H8J5 431 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 WRAP73Q9P2S5 460 aaPredicted RBP14.48□□□□□ -0.09
PTPRE-204ENST00000455661 ZNF148Q9UQR1 794 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 ALOX15BO15296 676 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 TM9SF1O15321 606 aa14.48□□□□□ -0.09
PTPRE-204ENST00000455661 DNAJC6O75061 913 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms