RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SNPHO15079 494 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 XPOTO43592 962 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 DTNBO60941 627 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 LRP3O75074 770 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 TOM1L1O75674 476 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 FGF19O95750 216 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 EDN1P05305 212 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 CD72P21854 359 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 PROZP22891 400 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 PAX3P23760 479 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 PRPHP41219 470 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 ARPP19P56211 112 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 OSTNP61366 133 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 GUCY1B3Q02153 619 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 MRPL58Q14197 206 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 LRRC32Q14392 662 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 NOLC1Q14978 699 aaKnown RBP eCLIP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 FAM78AQ5JUQ0 283 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 TANGO2Q6ICL3 276 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 ZPBP2Q6X784 338 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 YAF2Q8IY57 180 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 DCLK2Q8N568 766 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 IGSF22Q8N9C0 903 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 C3orf58Q8NDZ4 430 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 FAM3CQ92520 227 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 ZSCAN31Q96LW9 406 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 ASB16Q96NS5 453 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 NTPCRQ9BSD7 190 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 RTKNQ9BST9 563 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 CXCL16Q9H2A7 254 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 TRPV4Q9HBA0 871 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 GOLGA2P5Q9HBQ8 144 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 SH2B1Q9NRF2 756 aaPredicted RBP8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 KCND2Q9NZV8 630 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 FBXL5Q9UKA1 691 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 USP20Q9Y2K6 914 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 KIF3AQ9Y496 699 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 RALGAPA1Q6GYQ0 2036 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
NIF3L1-209ENST00000454952 DCHS1Q96JQ0 3298 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 OR6C75A6NL08 312 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 TRIM66O15016 1216 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CLDN3O15551 220 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 HIP1RO75146 1068 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CPB1P15086 417 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 FCARP24071 287 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 GUCY2CP25092 1073 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 GDI1P31150 447 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CNR2P34972 360 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 EPHB3P54753 998 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 EPHA5P54756 1037 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 SOX4Q06945 474 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 TWF1Q12792 350 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 MTAPQ13126 283 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 GRM2Q14416 872 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 LAIR1Q6GTX8 287 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 USP37Q86T82 979 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 MFSD6LQ8IWD5 586 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CEP120Q8N960 986 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CSGALNACT1Q8TDX6 532 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 ZMAT2Q96NC0 199 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 TBC1D32Q96NH3 1257 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 TARS2Q9BW92 718 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 PLA2G2FQ9BZM2 168 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 SLITRK6Q9H5Y7 841 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 C8orf33Q9H7E9 229 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 ZNF334Q9HCZ1 680 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 USP18Q9UMW8 372 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 ASB3Q9Y575 518 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CACNA1BQ00975 2339 aa8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 TPRP12270 2363 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-209ENST00000454952 CHADO15335 359 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 OAZ2O95190 189 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 SEC24AO95486 1093 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 CLTAP09496 248 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 MYL4P12829 197 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 PLS3P13797 630 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 CYP3A5P20815 502 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 U2AF2P26368 475 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■□□□□ 9.2
NIF3L1-209ENST00000454952 LRPAP1P30533 357 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ABCD1P33897 745 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ALDH1A3P47895 512 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 CXCL12P48061 93 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 PTGDRQ13258 359 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 FZD5Q13467 585 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 ECM1Q16610 540 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 RINT1Q6NUQ1 792 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 VITQ6UXI7 678 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 C1orf186Q6ZWK4 172 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 HAUS6Q7Z4H7 955 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 CCDC83Q8IWF9 413 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 SPEM1Q8N4L4 309 aa8.74□□□□□ -1.01
NIF3L1-209ENST00000454952 C4orf32Q8N8J7 132 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms