RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ACAP1Q15027 740 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 MRPL10Q7Z7H8 261 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 UBL4BQ8N7F7 174 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 RBBP8NLQ8NC74 664 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 CXorf38Q8TB03 319 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 RAET1EQ8TD07 263 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 HNRNPLLQ8WVV9 542 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 MAIP1Q8WWC4 291 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 HES6Q96HZ4 224 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 OSBPL9Q96SU4 736 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TLR10Q9BXR5 811 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TRIM6Q9C030 488 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 MTMR12Q9C0I1 747 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 SENP6Q9GZR1 1112 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 GDAP2Q9NXN4 497 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 DPP3Q9NY33 737 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 GABRQQ9UN88 632 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 STXBP5LQ9Y2K9 1186 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 GIT1Q9Y2X7 761 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 NUB1Q9Y5A7 615 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 PCDHB4Q9Y5E5 795 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 PTPRJQ12913 1337 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 TRIP11Q15643 1979 aa7.3□□□□□ -1.24
ECHDC1-210ENST00000454859 FANCGO15287 622 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 TREHO43280 583 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 LRRN2O75325 713 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ERLIN1O75477 346 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PALMO75781 387 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 MOCS3O95396 460 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SGPL1O95470 568 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CXCL8P10145 99 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 VDRP11473 427 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PRKAR2AP13861 404 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CTNNA2P26232 953 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 LRPAP1P30533 357 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 RPL9P32969 192 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SCNN1AP37088 669 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 TNFSF9P41273 254 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 NOP2P46087 812 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 NSFP46459 744 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 APBA1Q02410 837 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 MGAT3Q09327 533 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 NBPF20Q3BBV1 942 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ZBTB41Q5SVQ8 909 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CCDC181Q5TID7 509 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 JADE1Q6IE81 842 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 WDR93Q6P2C0 686 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PEX26Q7Z412 305 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 LIMS2Q7Z4I7 341 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 EFCAB13Q8IY85 973 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 RASGEF1CQ8N431 466 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 C1orf127Q8N9H9 656 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC35G2Q8TBE7 412 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PGBD4Q96DM1 585 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CARD6Q9BX69 1037 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 IRX2Q9BZI1 471 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 APOBEC3GQ9HC16 384 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 HMX1Q9NP08 348 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CISHQ9NSE2 258 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 BARX2Q9UMQ3 279 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CAPN6Q9Y6Q1 641 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CCDC151A5D8V7 595 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ATP1A1P05023 1023 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 USP8P40818 1118 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ASPAP45381 313 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 MYL6P60660 151 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 TNNC1P63316 161 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CNGA2Q16280 664 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SV2CQ496J9 727 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 RUFY4Q6ZNE9 571 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 NT5DC3Q86UY8 548 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ZDHHC17Q8IUH5 632 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 MCOLN2Q8IZK6 566 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CAGE1Q8TC20 777 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 FNIP1Q8TF40 1166 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 DDX27Q96GQ7 796 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 HPDLQ96IR7 371 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 UROC1Q96N76 676 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 FAM129AQ9BZQ8 928 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PARVAQ9NVD7 372 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SIX4Q9UIU6 781 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 PHF24Q9UPV7 400 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CEP350Q5VT06 3117 aa7.29□□□□□ -1.24
ECHDC1-210ENST00000454859 CILPO75339 1184 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 NPTXRO95502 500 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 ERBB2P04626 1255 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 ASGR1P07306 291 aa7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 HARSP12081 509 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-210ENST00000454859 ZSCAN20P17040 1043 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms