RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SIX4Q9UIU6 781 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 ITGA11Q9UKX5 1188 aa15.32■□□□□ 0.04
HDAC4-205ENST00000454542 USP15Q9Y4E8 981 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-205ENST00000454542 MAPK13O15264 365 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 CYP11A1P05108 521 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 TAF6P49848 677 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 CLDN10P78369 228 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 TFAMQ00059 246 aaKnown RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 ZNF280DQ6N043 979 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 ZC3H3Q8IXZ2 948 aaKnown RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 SMYD4Q8IYR2 804 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 APPL2Q8NEU8 664 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 OR5B17Q8NGF7 314 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 COL25A1Q9BXS0 654 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
HDAC4-205ENST00000454542 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 FAM50BQ9Y247 325 aa15.31■□□□□ 0.04
HDAC4-205ENST00000454542 CALUO43852 315 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-205ENST00000454542 EXOC3O60645 756 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 OAZ2O95190 189 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ITGB3P05106 788 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 TMEM191BP0C7N4 346 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 POLR2BP30876 1174 aaKnown RBP15.3■□□□□ 0.04
HDAC4-205ENST00000454542 PNPLA4P41247 253 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ROR1Q01973 937 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ITIH3Q06033 890 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ENPEPQ07075 957 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 EDRF1Q3B7T1 1238 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 LMBRD2Q68DH5 695 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-205ENST00000454542 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 FEZF2Q8TBJ5 459 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
HDAC4-205ENST00000454542 CACTINQ8WUQ7 758 aaKnown RBP15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ANKRD36BP1Q96IX9 119 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 SENP8Q96LD8 212 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 ADAM7Q9H2U9 754 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 CDY1Q9Y6F8 540 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 C5orf42Q9H799 3197 aa15.3■□□□□ 0.04
HDAC4-205ENST00000454542 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 H7C4K7 107 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
HDAC4-205ENST00000454542 POU2F2P09086 479 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 ODC1P11926 461 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 BMP6P22004 513 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 NR2F2P24468 414 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 HOXA9P31269 272 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 PRCPP42785 496 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 CASP4P49662 377 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 ZP2Q05996 745 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 SV2CQ496J9 727 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 CENPPQ6IPU0 288 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 C15orf39Q6ZRI6 1047 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 GLYCTKQ8IVS8 523 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 PARD3BQ8TEW8 1205 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-205ENST00000454542 OXCT2Q9BYC2 517 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-205ENST00000454542 LMBRD1Q9NUN5 540 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 ZDHHC7Q9NXF8 308 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 DPP7Q9UHL4 492 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 MAPK8IP1Q9UQF2 711 aa15.29■□□□□ 0.04
HDAC4-205ENST00000454542 ARHGEF37A1IGU5 675 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 LRRIQ3A6PVS8 624 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 ABLIM3O94929 683 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 OR1D2P34982 312 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 YWHAHQ04917 246 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 MORC3Q14149 939 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 DUOXA2Q1HG44 320 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 ELMSAN1Q6PJG2 1045 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 FOXR2Q6PJQ5 311 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 DSTYKQ6XUX3 929 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 GPR149Q86SP6 731 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 PALB2Q86YC2 1186 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 ADHFE1Q8IWW8 467 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 C12orf76Q8N812 135 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 KREMEN2Q8NCW0 462 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 ZNF707Q96C28 371 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 NECTIN4Q96NY8 510 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 NECAB3Q96P71 396 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-205ENST00000454542 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 CDH22Q9UJ99 828 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 AGAP1Q9UPQ3 857 aa15.28■□□□□ 0.04
HDAC4-205ENST00000454542 KPNA7A9QM74 516 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 ZMYND10O75800 440 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 AKAP3O75969 853 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms