RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 ACVR2BQ13705 512 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 MOGSQ13724 837 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 STAT4Q14765 748 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 IFT74Q96LB3 600 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 KIAA1683Q9H0B3 1180 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 CBX6O95503 412 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 MAN1A1P33908 653 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 TDRD10Q5VZ19 366 aaKnown RBP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 CCDC89Q8N998 374 aa13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
THUMPD3-206ENST00000452837 HNRNPDLO14979 420 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 NEBLO76041 1014 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ACO1P21399 889 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 SLC8A3P57103 927 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 PSMC5P62195 406 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 IL9RQ01113 521 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 EFTUD2Q15029 972 aaKnown RBP eCLIP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ZNF449Q6P9G9 518 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 MFSD7Q6UXD7 560 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 PPP1R21Q6ZMI0 780 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 RELL1Q8IUW5 271 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 RHOT1Q8IXI2 618 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 DEFB129Q9H1M3 183 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 TRABDQ9H4I3 376 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 PCDHB2Q9Y5E7 798 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 VNN1O95497 513 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ACOT2P49753 483 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 NOMO3P69849 1222 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 PTP4A2Q12974 167 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ANKRD35Q8N283 1001 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 GPD1LQ8N335 351 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 HAPLN2Q9GZV7 340 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ZNF70Q9UC06 446 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-206ENST00000452837 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 LIASO43766 372 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 NLRP11P59045 1033 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 LACTBP83111 547 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ZNF252P-AS1Q0IIN9 211 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 PGM5Q15124 567 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 VSIG1Q86XK7 387 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 KATNAL2Q8IYT4 538 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ACTL7BQ9Y614 415 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 CCDC189A1A4V9 331 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 PSTPIP1O43586 416 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 PEX11AO75192 247 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ARSEP51690 589 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 SP4Q02446 784 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 GPS1Q13098 491 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 TMEM270Q6UE05 265 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 ANKMY2Q8IV38 441 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 TAB3Q8N5C8 712 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 FAM13CQ8NE31 585 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 XPNPEP1Q9NQW7 623 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 UTRNP46939 3433 aa13.31□□□□□ -0.28
THUMPD3-206ENST00000452837 DNALI1O14645 258 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms