RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC22A17Q8WUG5 538 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 SUSD3Q96L08 255 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 LMBRD1Q9NUN5 540 aa21.57■■□□□ 1.04
COL9A3-202ENST00000452372 SYN3O14994 580 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 TEX28O15482 410 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 EXOC3O60645 756 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 SRGAP2BP0DMP2 458 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 PAX3P23760 479 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 MCM4P33991 863 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 AARSP49588 968 aaKnown RBP eCLIP21.56■■□□□ 1.04
COL9A3-202ENST00000452372 TFAMQ00059 246 aaKnown RBP21.56■■□□□ 1.04
COL9A3-202ENST00000452372 NFIL3Q16649 462 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 PRSS55Q6UWB4 352 aaPredicted RBP21.56■■□□□ 1.04
COL9A3-202ENST00000452372 TRIM67Q6ZTA4 783 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 CASP10Q92851 521 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 MFSD14AQ96MC6 490 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 ADAM7Q9H2U9 754 aa21.56■■□□□ 1.04
COL9A3-202ENST00000452372 SCN1AP35498 2009 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 TULP1O00294 542 aaPredicted RBP21.55■■□□□ 1.04
COL9A3-202ENST00000452372 PPEF2O14830 753 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 C1RP00736 705 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 NR3C1P04150 777 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 ADH1AP07327 375 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 TKTP29401 623 aaKnown RBP21.55■■□□□ 1.04
COL9A3-202ENST00000452372 PRCPP42785 496 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 CLCN4P51793 760 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 LILRA4P59901 499 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 CYP24A1Q07973 514 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 PSMD6Q15008 389 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 PSMD5Q16401 504 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 BMP8AQ7Z5Y6 402 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 INTS13Q9NVM9 706 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 MAN1B1Q9UKM7 699 aa21.55■■□□□ 1.04
COL9A3-202ENST00000452372 M0QZQ0 153 aa21.54■■□□□ 1.04
COL9A3-202ENST00000452372 EPCAMP16422 314 aa21.54■■□□□ 1.04
COL9A3-202ENST00000452372 ANKS3Q6ZW76 656 aa21.54■■□□□ 1.04
COL9A3-202ENST00000452372 C12orf76Q8N812 135 aaPredicted RBP21.54■■□□□ 1.04
COL9A3-202ENST00000452372 CLSTN3Q9BQT9 956 aa21.54■■□□□ 1.04
COL9A3-202ENST00000452372 PCDHB8Q9UN66 801 aa21.54■■□□□ 1.04
COL9A3-202ENST00000452372 TMEM221A6NGB7 291 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 M0R296 226 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 RPL17P18621 184 aaKnown RBP21.53■■□□□ 1.04
COL9A3-202ENST00000452372 DUOXA2Q1HG44 320 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 ZCWPW2Q504Y3 356 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 VARS2Q5ST30 1063 aaKnown RBP21.53■■□□□ 1.04
COL9A3-202ENST00000452372 ISM2Q6H9L7 571 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 WDR49Q8IV35 697 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 ADSSL1Q8N142 457 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 C1orf127Q8N9H9 656 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 APPL2Q8NEU8 664 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 CXorf38Q8TB03 319 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 ANKRD36BP1Q96IX9 119 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 FNBP1Q96RU3 617 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 POMKQ9H5K3 350 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 MTRRQ9UBK8 725 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 ITGA11Q9UKX5 1188 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 BACE2Q9Y5Z0 518 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 PTPRJQ12913 1337 aa21.53■■□□□ 1.04
COL9A3-202ENST00000452372 SPTLC1O15269 473 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 ITGB3P05106 788 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 WEE2P0C1S8 567 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 TMEM191BP0C7N4 346 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 RPL13P26373 211 aaKnown RBP21.52■■□□□ 1.04
COL9A3-202ENST00000452372 CASP4P49662 377 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 TAF6P49848 677 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 ITIH3Q06033 890 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 MORC3Q14149 939 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 MRPL58Q14197 206 aaKnown RBP21.52■■□□□ 1.04
COL9A3-202ENST00000452372 CAMK4Q16566 473 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 EDRF1Q3B7T1 1238 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 LMBRD2Q68DH5 695 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-202ENST00000452372 CENPPQ6IPU0 288 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 DSTYKQ6XUX3 929 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 CCDC127Q96BQ5 260 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 FAM84AQ96KN4 292 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 MTMR12Q9C0I1 747 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 GZF1Q9H116 711 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-202ENST00000452372 KIAA1468Q9P260 1216 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 FRMD4BQ9Y2L6 1034 aa21.52■■□□□ 1.04
COL9A3-202ENST00000452372 MTCL1Q9Y4B5 1905 aaKnown RBP21.51■■□□□ 1.03
COL9A3-202ENST00000452372 GOLGA6L22H0YM25 854 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 MAPK13O15264 365 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 GLUD1P00367 558 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 TNNC2P02585 160 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 DLATP10515 647 aaKnown RBP21.51■■□□□ 1.03
COL9A3-202ENST00000452372 TNNI1P19237 187 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 NR2F2P24468 414 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 POLR2BP30876 1174 aaKnown RBP21.51■■□□□ 1.03
COL9A3-202ENST00000452372 ADAM9Q13443 819 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 LILRA6Q6PI73 481 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 PALB2Q86YC2 1186 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 CSGALNACT2Q8N6G5 542 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 ASIC4Q96FT7 647 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 BORCS6Q96GS4 357 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 SENP8Q96LD8 212 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 CGRRF1Q99675 332 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 DZANK1Q9NVP4 752 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 AGAP1Q9UPQ3 857 aa21.51■■□□□ 1.03
COL9A3-202ENST00000452372 PLXNA3P51805 1871 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms