RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 LGALS16A8MUM7 142 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 PPEF2O14830 753 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 ASS1P00966 412 aaKnown RBP12.46□□□□□ -0.41
SCN9A-204ENST00000452182 HLA-DRAP01903 254 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 PIK3CAP42336 1068 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 TAF6P49848 677 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 MYL6P60660 151 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 PLCB3Q01970 1234 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 SV2CQ496J9 727 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 HPDLQ96IR7 371 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 SLC28A3Q9HAS3 691 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 GDAP2Q9NXN4 497 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
SCN9A-204ENST00000452182 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.41
SCN9A-204ENST00000452182 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 SERPINC1P01008 464 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 ITGB1P05556 798 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 PBX3P40426 434 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 FANCCQ00597 558 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 ELAVL2Q12926 359 aaKnown RBP12.45□□□□□ -0.42
SCN9A-204ENST00000452182 UVSSAQ2YD98 709 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 FILIP1LQ4L180 1135 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 SCARA3Q6AZY7 606 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TMEM173Q86WV6 379 aaPredicted RBP12.45□□□□□ -0.42
SCN9A-204ENST00000452182 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 CCDC150Q8NCX0 1101 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 SEMA4DQ92854 862 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TIFAQ96CG3 184 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 SUSD3Q96L08 255 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 IMPG2Q9BZV3 1241 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 NKX2-4Q9H2Z4 354 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
SCN9A-204ENST00000452182 SF3B1O75533 1304 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCN9A-204ENST00000452182 TMEM265A0A087WTH1 108 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 F8W810 466 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 M0QZQ0 153 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 HAX1O00165 279 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 SPTLC1O15269 473 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 TADA2AO75478 443 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 FGF18O76093 207 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 CTNNB1P35222 781 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 KRT17Q04695 432 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 ZNF699Q32M78 642 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 FKBP15Q5T1M5 1219 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 BCL7CQ8WUZ0 217 aaPredicted RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 C17orf80Q9BSJ5 609 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 C11orf84Q9BUA3 381 aaPredicted RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 GCNT4Q9P109 453 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 LZTS1Q9Y250 596 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 CHD7Q9P2D1 2997 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 PLXNA4Q9HCM2 1894 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 FAM163BP0C2L3 166 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 UBASH3AP57075 661 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 NOP14P78316 857 aaKnown RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 UBE3AQ05086 875 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 NR1I3Q14994 352 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 WDR72Q3MJ13 1102 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 WDR44Q5JSH3 913 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 FUT10Q6P4F1 479 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 TRIM65Q6PJ69 517 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 LIMS2Q7Z4I7 341 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 KLHL23Q8NBE8 558 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 SENP8Q96LD8 212 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 NAP1L5Q96NT1 182 aaPredicted RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 ERGIC2Q96RQ1 377 aa12.44□□□□□ -0.42
SCN9A-204ENST00000452182 FAM124BQ9H5Z6 455 aaPredicted RBP12.44□□□□□ -0.42
SCN9A-204ENST00000452182 A0A1W2PQC6 194 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 H3BNC9 293 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 SYN3O14994 580 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
SCN9A-204ENST00000452182 LRRN2O75325 713 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 P4HA1P13674 534 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 TYMPP19971 482 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 PON1P27169 355 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 BRCC3P46736 316 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 UBXN1Q04323 297 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 SMYD5Q6GMV2 418 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 GPR65Q8IYL9 337 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 TOP6BLQ8N6T0 577 aa12.43□□□□□ -0.42
SCN9A-204ENST00000452182 SPATA18Q8TC71 538 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms