RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 DDX3YO15523 660 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 RTN2O75298 545 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 MAFO75444 373 aaPredicted RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 GLI1P08151 1106 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 GZMAP12544 262 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CSF2RAP15509 400 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 THPOP40225 353 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 TNNC1P63316 161 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 GCNT1Q02742 428 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 BFSP2Q13515 415 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CAPSQ13938 189 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 ZNF618Q5T7W0 954 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 DNAJB3Q8WWF6 145 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 TATDN2Q93075 761 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■□□□ 12.4
PKP4-206ENST00000452162 ACP6Q9NPH0 428 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 AGO2Q9UKV8 859 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 NOC2LQ9Y3T9 749 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 K7ERI5 159 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 C22orf31O95567 290 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 IQCF3P0C7M6 154 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 CYP11B1P15538 503 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 EPHB4P54760 987 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 ZACNQ401N2 412 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 SLFN12LQ6IEE8 588 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 DDX1Q92499 740 aaKnown RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 ZBTB45Q96K62 511 aaPredicted RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 TTC7AQ9ULT0 858 aaPredicted RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 PTPRJQ12913 1337 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 A0A0B4J269 797 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 FAM170AA1A519 330 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 MTA2O94776 668 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 HEXIM1O94992 359 aaKnown RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 C4BPAP04003 597 aaKnown RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 MMEP08473 750 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 CTSHP09668 335 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 GPC5P78333 572 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 CDR2Q01850 454 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 DRP2Q13474 957 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 C11orf63Q6NUN7 778 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 TAF2Q6P1X5 1199 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 CAVIN3Q969G5 261 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 GDAP1L1Q96MZ0 367 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 PI4K2AQ9BTU6 479 aa11.47□□□□□ -0.57
PKP4-206ENST00000452162 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
PKP4-206ENST00000452162 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
PKP4-206ENST00000452162 RAD51CO43502 376 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 ACRP10323 421 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 SELPP16109 830 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 ACOT2P49753 483 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 PDE6CP51160 858 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 FPGSQ05932 587 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 MBTPS1Q14703 1052 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 GPNMBQ14956 572 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 ZBTB41Q5SVQ8 909 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 DCAF12L1Q5VU92 463 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 TDRD10Q5VZ19 366 aaKnown RBP11.46□□□□□ -0.57
PKP4-206ENST00000452162 EMBQ6PCB8 327 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 IFT20Q8IY31 132 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 TMEM199Q8N511 208 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 FAM71BQ8TC56 605 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 FAM81BQ96LP2 452 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 OSBPL7Q9BZF2 842 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 MED4Q9NPJ6 270 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 C1orf112Q9NSG2 853 aa11.46□□□□□ -0.57
PKP4-206ENST00000452162 ZSCAN5CA6NGD5 496 aaPredicted RBP11.46□□□□□ -0.58
PKP4-206ENST00000452162 HLA-DRAP01903 254 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 TMEM62Q0P6H9 643 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 NNTQ13423 1086 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.58
PKP4-206ENST00000452162 SND1Q7KZF4 910 aaKnown RBP eCLIP11.46□□□□□ -0.589e-9■□□□□ 8.6
PKP4-206ENST00000452162 C16orf59Q7L2K0 433 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 DEFB128Q7Z7B8 93 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 KLHL7Q8IXQ5 586 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 FNBP1Q96RU3 617 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 PRO3102Q9H379 93 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 RBAKQ9NYW8 714 aaPredicted RBP11.46□□□□□ -0.58
PKP4-206ENST00000452162 CTTNBP2NLQ9P2B4 639 aa11.46□□□□□ -0.58
PKP4-206ENST00000452162 CNTNAP2Q9UHC6 1331 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
PKP4-206ENST00000452162 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms