RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SHBGP04278 402 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 CLTAP09496 248 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 RFC5P40937 340 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 PRRT2Q7Z6L0 340 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 PPP1R16BQ96T49 567 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 GPR20Q99678 358 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 HEMGNQ9BXL5 484 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 PDGFCQ9NRA1 345 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 FAM187AA6NFU0 413 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 HNRNPH1P31943 449 aaKnown RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 SKOR1P84550 965 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-202ENST00000451716 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
COL27A1-202ENST00000451716 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 B4GALT5O43286 388 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CYP1A1P04798 512 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CD151P48509 253 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 MYL6P60660 151 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 PPP2R5EQ16537 467 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 MORC4Q8TE76 937 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 PCYOX1Q9UHG3 505 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 HMGB1P1B2RPK0 211 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 NOMO3P69849 1222 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 CENPCQ03188 943 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 RBBP5Q15291 538 aaKnown RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 TRIP13Q15645 432 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 ABRAQ8N0Z2 381 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 EPB41L4BQ9H329 900 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
COL27A1-202ENST00000451716 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
COL27A1-202ENST00000451716 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 FAM189A1O60320 539 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 PRKCBP05771 671 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 WEE2P0C1S8 567 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 TGFB3P10600 412 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 NEFHP12036 1026 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 MAGEA8P43361 318 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 CLCN3P51790 818 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 SEC24CP53992 1094 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 BPIFB4P59827 614 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 IGBP1P78318 339 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.35
COL27A1-202ENST00000451716 MTMR3Q13615 1198 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 SGO2Q562F6 1265 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 ERO1BQ86YB8 467 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 KAT2BQ92831 832 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 TXLNGYQ9BZA5 131 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 SEMA4AQ9H3S1 761 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 KLHL11Q9NVR0 708 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 BRCA2P51587 3418 aa12.83□□□□□ -0.35
COL27A1-202ENST00000451716 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 TOM1L1O75674 476 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 HSPA6P17066 643 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 TMOD1P28289 359 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 TAS2R40P59535 323 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CCDC25Q86WR0 208 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 ACO2Q99798 780 aaKnown RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 MRPL4Q9BYD3 311 aaKnown RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 R3HDM2Q9Y2K5 976 aaKnown RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 PYGLP06737 847 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 FGFR4P22455 802 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 LSP1P33241 339 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 VPS41P49754 854 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 PMS2P54278 862 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 RPL7AP62424 266 aaKnown RBP12.83□□□□□ -0.36
COL27A1-202ENST00000451716 ENPEPQ07075 957 aa12.83□□□□□ -0.36
COL27A1-202ENST00000451716 MAMLD1Q13495 774 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms