RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 UBE3AQ05086 875 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 TRPC3Q13507 836 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 TCP11X2Q5H9J9 407 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 KRT39Q6A163 491 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 LRRC52Q8N7C0 313 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 TAS1R2Q8TE23 839 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 SUSD3Q96L08 255 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 ZNF560Q96MR9 790 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 HERC2P3Q9BVR0 1158 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 LZTS1Q9Y250 596 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS33A-202ENST00000451053 SCN1AP35498 2009 aa14.03□□□□□ -0.16
VPS33A-202ENST00000451053 LRRN2O75325 713 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 SOD2P04179 222 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.17
VPS33A-202ENST00000451053 TKTP29401 623 aaKnown RBP14.02□□□□□ -0.17
VPS33A-202ENST00000451053 IRS1P35568 1242 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 PNPLA4P41247 253 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 FMO5P49326 533 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 ERVFC1P60507 584 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 FANCCQ00597 558 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 KCNH2Q12809 1159 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 NCOA4Q13772 614 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 SV2CQ496J9 727 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 FILIP1LQ4L180 1135 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 FAM171A1Q5VUB5 890 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 VPS52Q8N1B4 723 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 AUTS2Q8WXX7 1259 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 SEMA4DQ92854 862 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 HPDLQ96IR7 371 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 TUBGCP2Q9BSJ2 902 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 ZBP1Q9H171 429 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 XYLT2Q9H1B5 865 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 TLR9Q9NR96 1032 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 TAB2Q9NYJ8 693 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 LIMA1Q9UHB6 759 aaKnown RBP14.02□□□□□ -0.17
VPS33A-202ENST00000451053 PUF60Q9UHX1 559 aaKnown RBP14.02□□□□□ -0.17
VPS33A-202ENST00000451053 ATG2AQ2TAZ0 1938 aa14.02□□□□□ -0.17
VPS33A-202ENST00000451053 KPNA7A9QM74 516 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 M0QZQ0 153 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 FSCN2O14926 492 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 TRAPPC3O43617 180 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
VPS33A-202ENST00000451053 ATP1A3P13637 1013 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 FGFR3P22607 806 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 MYL7Q01449 175 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 ELAVL2Q12926 359 aaKnown RBP14.01□□□□□ -0.17
VPS33A-202ENST00000451053 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 ADGRE1Q14246 886 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 KRT31Q15323 416 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 MAN2A1Q16706 1144 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 USP41Q3LFD5 358 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 MIIPQ5JXC2 388 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 RTP2Q5QGT7 225 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 DSTYKQ6XUX3 929 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.01□□□□□ -0.17
VPS33A-202ENST00000451053 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 SENP8Q96LD8 212 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 TCF25Q9BQ70 676 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 PI4K2AQ9BTU6 479 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 LMAN2LQ9H0V9 348 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPS33A-202ENST00000451053 ENTPD7Q9NQZ7 604 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
VPS33A-202ENST00000451053 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
VPS33A-202ENST00000451053 VWA8A3KMH1 1905 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 LRRC10BA6NIK2 292 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 C2CD2LO14523 706 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 CYB561D2O14569 222 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 N4BP1O75113 896 aaKnown RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 CLSTN1O94985 981 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 STAU1O95793 577 aaKnown RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 CTSAP10619 480 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 ATICP31939 592 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 GLUD2P49448 558 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 UBASH3AP57075 661 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 DSG1Q02413 1049 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 PTPN14Q15678 1187 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 ZNF699Q32M78 642 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 PLPP4Q5VZY2 271 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 SPOPLQ6IQ16 392 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 PRSS55Q6UWB4 352 aaPredicted RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 TMC7Q7Z402 723 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 FBXL13Q8NEE6 735 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 MRPL38Q96DV4 380 aaKnown RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 GUCD1Q96NT3 240 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 TTPALQ9BTX7 342 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 CHST7Q9NS84 486 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 GDAP2Q9NXN4 497 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 POLIQ9UNA4 740 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 COQ4Q9Y3A0 265 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 TIMM13Q9Y5L4 95 aaPredicted RBP14□□□□□ -0.17
VPS33A-202ENST00000451053 SNX9Q9Y5X1 595 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 LAMA3Q16787 3333 aa14□□□□□ -0.17
VPS33A-202ENST00000451053 TSC2P49815 1807 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms