RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ZNF560Q96MR9 790 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 MKNK1Q9BUB5 465 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 DZANK1Q9NVP4 752 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 SIX4Q9UIU6 781 aa15.51■□□□□ 0.07
COL3A1-203ENST00000450867 PSMA7O14818 248 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 OAZ2O95190 189 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 ITGB3P05106 788 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 CYP11A1P05108 521 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 TMEM191BP0C7N4 346 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 HOXB8P17481 243 aaPredicted RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 KCNA5P22460 613 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 CCNE1P24864 410 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 KLRC2P26717 231 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 AP3M2P53677 418 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 TFF2Q03403 129 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 STIM1Q13586 685 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 SLC8B1Q6J4K2 584 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 ANKRD54Q6NXT1 300 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 SMRP1Q8NCR6 262 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 GPT2Q8TD30 523 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 ASB2Q96Q27 587 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 OXCT2Q9BYC2 517 aaPredicted RBP15.5■□□□□ 0.07
COL3A1-203ENST00000450867 FRMD4BQ9Y2L6 1034 aa15.5■□□□□ 0.07
COL3A1-203ENST00000450867 C5orf42Q9H799 3197 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 ARHGEF37A1IGU5 675 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 LRRIQ3A6PVS8 624 aaPredicted RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 H7C4K7 107 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 IKBKBO14920 756 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 AKAP3O75969 853 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 STAU1O95793 577 aaKnown RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 TNNC2P02585 160 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 EPCAMP16422 314 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 POLR2BP30876 1174 aaKnown RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 CA8P35219 290 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 RBP5P82980 135 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 ADAM9Q13443 819 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 RAB33AQ14088 237 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 CAMK4Q16566 473 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 SV2CQ496J9 727 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 LMBRD2Q68DH5 695 aaPredicted RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 SYCE2Q6PIF2 218 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 INTS8Q75QN2 995 aaKnown RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 LIMS2Q7Z4I7 341 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 ZNF516Q92618 1163 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 SENP8Q96LD8 212 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 RHOBTB2Q9BYZ6 727 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 NUP62CLQ9H1M0 184 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 GDAP2Q9NXN4 497 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 CD207Q9UJ71 328 aa15.49■□□□□ 0.07
COL3A1-203ENST00000450867 BARX2Q9UMQ3 279 aaPredicted RBP15.49■□□□□ 0.07
COL3A1-203ENST00000450867 KPNA7A9QM74 516 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 H3BQ06 376 aaPredicted RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 SLC16A3O15427 465 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 MBD3O95983 291 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 GLUD1P00367 558 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 DLATP10515 647 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 ODC1P11926 461 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 RPL17P18621 184 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 TNNI1P19237 187 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 PSMC2P35998 433 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 PMS1P54277 932 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 SMAD4Q13485 552 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 C1orf220Q5T0J3 134 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 ANKRD40Q6AI12 368 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 ZNF280DQ6N043 979 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 TTI2Q6NXR4 508 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 RBM43Q6ZSC3 357 aaKnown RBP15.48■□□□□ 0.07
COL3A1-203ENST00000450867 USP37Q86T82 979 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 SPATA18Q8TC71 538 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 CCDC127Q96BQ5 260 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 TSG101Q99816 390 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 S1PR5Q9H228 398 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 PLEKHA4Q9H4M7 779 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 DPP7Q9UHL4 492 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 FBXW11Q9UKB1 542 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 AGAP1Q9UPQ3 857 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 DOCK6Q96HP0 2047 aa15.48■□□□□ 0.07
COL3A1-203ENST00000450867 PTPRDP23468 1912 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 GRXCR2A6NFK2 248 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 BIN1O00499 593 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 CETN3O15182 167 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 ADAM12O43184 909 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 TGM5O43548 720 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 ABLIM3O94929 683 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 BMP1P13497 986 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 VCANP13611 3396 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 BFSP1Q12934 665 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 CEP135Q66GS9 1140 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms