RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SYMPKQ92797 1274 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SGF29Q96ES7 293 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZNF333Q96JL9 665 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TUBA1CQ9BQE3 449 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FAM213AQ9BRX8 229 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MND1Q9BWT6 205 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 YTHDF1Q9BYJ9 559 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 TMEM245Q9H330 911 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLA2Q9H6Q3 261 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RPRD1BQ9NQG5 326 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF3Q9NR81 526 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ADD3Q9UEY8 706 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 VPS4AQ9UN37 437 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PHF8Q9UPP1 1060 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 L3MBTL1Q9Y468 752 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MROH5Q6ZUA9 1318 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PNPLA7Q6ZV29 1317 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ANKRD26Q9UPS8 1709 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZNF701M0R085 212 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 RAD51BO15315 384 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 JAK2O60674 1132 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RTN2O75298 545 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 USP1O94782 785 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 APOA4P06727 396 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 LINGO3P0C6S8 592 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CD44P16070 742 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CCNA2P20248 432 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CNTFP26441 200 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 IREB2P48200 963 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 GSSP48637 474 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC9A3P48764 834 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ABCE1P61221 599 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 ADAM17P78536 824 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 S100A12P80511 92 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ENPEPQ07075 957 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 LSAMPQ13449 338 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZFP69Q49AA0 526 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC10A5Q5PT55 438 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MZT2BQ6NZ67 158 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TPTE2Q6XPS3 522 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 STK32CQ86UX6 486 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PALB2Q86YC2 1186 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CAMK1DQ8IU85 385 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RTKN2Q8IZC4 609 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 NDUFAF2Q8N183 169 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ADCY4Q8NFM4 1077 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CLHC1Q8NHS4 586 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SCFD2Q8WU76 684 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PAGE5Q96GU1 130 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FAR2Q96K12 515 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CORO1BQ9BR76 489 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMEM109Q9BVC6 243 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CCDC8Q9H0W5 538 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 RMND5AQ9H871 391 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MANSC1Q9H8J5 431 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CYP4F12Q9HCS2 524 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SH3GLB2Q9NR46 395 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CNNM1Q9NRU3 951 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FARSBQ9NSD9 589 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 FAM207AQ9NSI2 230 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 PARVAQ9NVD7 372 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF38Q9NXL2 777 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.31□□□□□ -2.04
USP53-202ENST00000450251 LMCD1Q9NZU5 365 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZMAT5Q9UDW3 170 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 GLS2Q9UI32 602 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FBXO2Q9UK22 296 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 PCDHA12Q9UN75 941 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMEM98Q9Y2Y6 226 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TELO2Q9Y4R8 837 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 COL4A3BPQ9Y5P4 624 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 GPR75-ASB3A0A0A6YYF3 556 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 GOLGA8JA6NMD2 632 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 C2orf74A8MZ97 194 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 B2RBV5 119 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 E7EWF7 191 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLCO1B7G3V0H7 640 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 GNGT2O14610 69 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 FGGP02679 453 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ABHD2P08910 425 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZCCHC18P0CG32 403 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 THRAP10827 490 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CYP2C9P11712 490 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MYL4P12829 197 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RARGP13631 454 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ATP1A3P13637 1013 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PRDX6P30041 224 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 BCAP31P51572 246 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HSPA2P54652 639 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 COPZ1P61923 177 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ARID5AQ03989 594 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CDK18Q07002 472 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZNF844Q08AG5 666 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ALCAMQ13740 583 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 HERC3Q15034 1050 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SYDE2Q5VT97 1194 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 JADE1Q6IE81 842 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SULT6B1Q6IMI4 303 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SNX32Q86XE0 403 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CCDC33Q8N5R6 958 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms