RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 R3HCC1Q9Y3T6 440 aaKnown RBP16.8■□□□□ 0.28
LIMS1-210ENST00000449684 ARIH1Q9Y4X5 557 aaPredicted RBP16.8■□□□□ 0.28
LIMS1-210ENST00000449684 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
LIMS1-210ENST00000449684 ZFP37Q9Y6Q3 630 aaPredicted RBP16.8■□□□□ 0.28
LIMS1-210ENST00000449684 ABLIM3O94929 683 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 LAMP2P13473 410 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 AFMP43652 599 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 LILRA4P59901 499 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 KRT85P78386 507 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 TFAMQ00059 246 aaKnown RBP16.79■□□□□ 0.28
LIMS1-210ENST00000449684 ADCY1Q08828 1119 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 BECN1Q14457 450 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
LIMS1-210ENST00000449684 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 OVOS1Q6IE37 1185 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 METTL23Q86XA0 190 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 NT5DC4Q86YG4 428 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
LIMS1-210ENST00000449684 ASIC4Q96FT7 647 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 SENP8Q96LD8 212 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 SMOC2Q9H3U7 446 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 RBAKQ9NYW8 714 aaPredicted RBP16.79■□□□□ 0.28
LIMS1-210ENST00000449684 RCOR1Q9UKL0 485 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
LIMS1-210ENST00000449684 GOLGA8IPA6NC78 632 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 GOLGA8JA6NMD2 632 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 PPEF2O14830 753 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
LIMS1-210ENST00000449684 EXTL3O43909 919 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 OAZ2O95190 189 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 POU2F2P09086 479 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 PTPN2P17706 415 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 TYMPP19971 482 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 TAF6P49848 677 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 IQCEQ6IPM2 695 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
LIMS1-210ENST00000449684 UNC13DQ70J99 1090 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 TCEAL8Q8IYN2 117 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 HPS3Q969F9 1004 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 HCFC1R1Q9NWW0 138 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
LIMS1-210ENST00000449684 AFF4Q9UHB7 1163 aaKnown RBP16.78■□□□□ 0.28
LIMS1-210ENST00000449684 CDH7Q9ULB5 785 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 MAFFQ9ULX9 164 aa16.78■□□□□ 0.28
LIMS1-210ENST00000449684 MRPS23Q9Y3D9 190 aaKnown RBP16.78■□□□□ 0.28
LIMS1-210ENST00000449684 PIRO00625 290 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.28
LIMS1-210ENST00000449684 RFX1P22670 979 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 AARSP49588 968 aaKnown RBP eCLIP16.77■□□□□ 0.28
LIMS1-210ENST00000449684 SV2CQ496J9 727 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 GPD1LQ8N335 351 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 FGF13Q92913 245 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 ZNF512Q96ME7 567 aaPredicted RBP16.77■□□□□ 0.28
LIMS1-210ENST00000449684 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 CORO1BQ9BR76 489 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 DSEQ9UL01 958 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 DUSP12Q9UNI6 340 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 INSL5Q9Y5Q6 135 aa16.77■□□□□ 0.28
LIMS1-210ENST00000449684 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 STK25O00506 426 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 CYB561D2O14569 222 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 SEC24AO95486 1093 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 RHOP08100 348 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 PLA2G5P39877 138 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 RNF19BQ6ZMZ0 732 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 MTSS1LQ765P7 747 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 PDZD4Q76G19 769 aaPredicted RBP16.76■□□□□ 0.27
LIMS1-210ENST00000449684 EFCAB13Q8IY85 973 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 SLC44A3Q8N4M1 653 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 ITFG1Q8TB96 612 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
LIMS1-210ENST00000449684 PGLYRP2Q96PD5 576 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
LIMS1-210ENST00000449684 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 ZNF197O14709 1029 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 SPTLC1O15269 473 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 PDGFBP01127 241 aaPredicted RBP16.75■□□□□ 0.27
LIMS1-210ENST00000449684 CFHP08603 1231 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 KRT19P08727 400 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 CASP1P29466 404 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 PNPLA4P41247 253 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 TWF1Q12792 350 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 PLD1Q13393 1074 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
LIMS1-210ENST00000449684 SURF1Q15526 300 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms