RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 LRRN2O75325 713 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 KIF4AO95239 1232 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 TMEM132DQ14C87 1099 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 PSMD6Q15008 389 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 KYAT1Q16773 422 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 FAM186BQ8IYM0 893 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 TGS1Q96RS0 853 aaKnown RBP10.62□□□□□ -0.71
CCDC171-203ENST00000449575 TSG101Q99816 390 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 ASB7Q9H672 318 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 SAMSN1Q9NSI8 373 aaKnown RBP10.62□□□□□ -0.71
CCDC171-203ENST00000449575 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 BRWD1Q9NSI6 2320 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 CETN3O15182 167 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 RPL13P26373 211 aaKnown RBP10.62□□□□□ -0.71
CCDC171-203ENST00000449575 CAMK1Q14012 370 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 IQCB1Q15051 598 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 UPP1Q16831 310 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 SPATA1Q5VX52 437 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 TAS1R1Q7RTX1 841 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 SLC39A11Q8N1S5 342 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 CXorf38Q8TB03 319 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 NCAPGQ9BPX3 1015 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 PRDM12Q9H4Q4 367 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 MMRN2Q9H8L6 949 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 ANO10Q9NW15 660 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 FRMD4BQ9Y2L6 1034 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 TSC2P49815 1807 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 EFCAB8A8MWE9 144 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 GRM6O15303 877 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 LPXNO60711 386 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 IL18RAPO95256 599 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 TNNI1P19237 187 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 OAS2P29728 719 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 PSMC2P35998 433 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 ALDH7A1P49419 539 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 PPP3CAQ08209 521 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 MYBPC2Q14324 1141 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 ZNF558Q96NG5 402 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 KIAA1586Q9HCI6 787 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 INTS13Q9NVM9 706 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 DPP3Q9NY33 737 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 SIX4Q9UIU6 781 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 FAN1Q9Y2M0 1017 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 RRP15Q9Y3B9 282 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 BICDL2A1A5D9 508 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 FGF18O76093 207 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 ALDH2P05091 517 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 LAG3P18627 525 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 PPP1R2P41236 205 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 BRCC3P46736 316 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 BFSP1Q12934 665 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 LEKR1Q6ZMV7 388 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 NAT10Q9H0A0 1025 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 HSD3B7Q9H2F3 369 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 UBQLN1Q9UMX0 589 aaKnown RBP10.61□□□□□ -0.71
CCDC171-203ENST00000449575 C2CD2Q9Y426 696 aa10.61□□□□□ -0.71
CCDC171-203ENST00000449575 C5orf67F2Z3F1 127 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 PODXLO00592 558 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 SPTLC1O15269 473 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 B3GAT3O94766 335 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 ITGB3P05106 788 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 VAMP7P51809 220 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 SMC1AQ14683 1233 aaKnown RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 NCAPHQ15003 741 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 FBXO22Q8NEZ5 403 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 SPPL3Q8TCT6 385 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 FNBP1Q96RU3 617 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 CGRRF1Q99675 332 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 NFE2L3Q9Y4A8 694 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 EPB41P11171 864 aaKnown RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 IRS1P35568 1242 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 ACTN2P35609 894 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 GCLMP48507 274 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 CLDN10P78369 228 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 TTC31Q49AM3 519 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 TDRD10Q5VZ19 366 aaKnown RBP10.6□□□□□ -0.71
CCDC171-203ENST00000449575 C9orf57Q5W0N0 161 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 CD302Q8IX05 232 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 AOPEPQ8N6M6 819 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 AUTS2Q8WXX7 1259 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 PPP1R13BQ96KQ4 1090 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 TMEM175Q9BSA9 504 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 SLC38A7Q9NVC3 462 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 FANCLQ9NW38 375 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 SPG21Q9NZD8 308 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 PCDHB12Q9Y5F1 795 aa10.6□□□□□ -0.71
CCDC171-203ENST00000449575 ANO9A1A5B4 782 aa10.59□□□□□ -0.71
CCDC171-203ENST00000449575 PIRO00625 290 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms