RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 KIF9Q9HAQ2 790 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 TRIM33Q9UPN9 1127 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 COL5A2P05997 1499 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 PDGFRBP09619 1106 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 BMP6P22004 513 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 YWHAHQ04917 246 aaPredicted RBP10.95□□□□□ -0.66
CTC1-202ENST00000449476 CUL2Q13617 745 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 SEZ6Q53EL9 994 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 TRPM8Q7Z2W7 1104 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 RASSF3Q86WH2 238 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 TTC8Q8TAM2 541 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 CYP2W1Q8TAV3 490 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 ACTRT1Q8TDG2 376 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 RAPGEF5Q92565 580 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 FGD4Q96M96 766 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 NT5C1AQ9BXI3 368 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 MAGEB5Q9BZ81 275 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 BLOC1S4Q9NUP1 217 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 SUN2Q9UH99 717 aa10.95□□□□□ -0.66
CTC1-202ENST00000449476 PDHA1P08559 390 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 RARBP10826 455 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 GZMAP12544 262 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 CYP11B1P15538 503 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 TMCO4Q5TGY1 634 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 C1orf131Q8NDD1 294 aaKnown RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 GMCL1P1Q8NEA9 526 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 KLF6Q99612 283 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 RSAD1Q9HA92 442 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 CACYBPQ9HB71 228 aaKnown RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 FAM49BQ9NUQ9 324 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 PRMT7Q9NVM4 692 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 TTC36A6NLP5 189 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 ZNF200P98182 395 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 ARHGEF6Q15052 776 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 AP1ARQ63HQ0 302 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 KDM7AQ6ZMT4 941 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 FBXO25Q8TCJ0 367 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 ATG4AQ8WYN0 398 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 FAM167BQ9BTA0 163 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 TSSK1BQ9BXA7 367 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 DRC3Q9H069 523 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 GTPBP10A4D1E9 387 aaKnown RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 GSTA4O15217 222 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 IL18RAPO95256 599 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 TFRCP02786 760 aaKnown RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 GLI1P08151 1106 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 DPEP1P16444 411 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 PRAMEP78395 509 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 MORF4L2Q15014 288 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 AGR3Q8TD06 166 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 PDCD6IPQ8WUM4 868 aaKnown RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 IFT43Q96FT9 208 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 EPAS1Q99814 870 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 SUDS3Q9H7L9 328 aaPredicted RBP10.94□□□□□ -0.66
CTC1-202ENST00000449476 AIPL1Q9NZN9 384 aa10.94□□□□□ -0.66
CTC1-202ENST00000449476 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 NVLO15381 856 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 TPI1P60174 286 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 CYP4A22Q5TCH4 519 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 RFX8Q6ZV50 586 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 LRRC43Q8N309 656 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 TAS1R2Q8TE23 839 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 NFIBO00712 420 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 DYNC1LI2O43237 492 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 HBP1O60381 514 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 BIRC2Q13490 618 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 RGS9BPQ6ZS82 235 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 COL23A1Q86Y22 540 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 UBA3Q8TBC4 463 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 ATP8B4Q8TF62 1192 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 SCFD2Q8WU76 684 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 CCDC138Q96M89 665 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 POP1Q99575 1024 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 PAK5Q9P286 719 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 RAB21Q9UL25 225 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 ABT1Q9ULW3 272 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 PPFIA2O75334 1257 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 GH1P01241 217 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 PPARGP37231 505 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 HSD17B4P51659 736 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 FASTKD1Q53R41 847 aaKnown RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 RNF135Q8IUD6 432 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 APPL2Q8NEU8 664 aa10.93□□□□□ -0.66
CTC1-202ENST00000449476 ACSF2Q96CM8 615 aaPredicted RBP10.93□□□□□ -0.66
CTC1-202ENST00000449476 CCDC124Q96CT7 223 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms