RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TMEM259Q4ZIN3 620 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 LRRC43Q8N309 656 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 KCNN1Q92952 543 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 GLIS2Q9BZE0 524 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZDHHC18Q9NUE0 388 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 EYA4O95677 639 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 FGGP02679 453 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 PSMD7P51665 324 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 NIM1KQ8IY84 436 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 INIPQ9NRY2 104 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 CHKBQ9Y259 395 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 R3HDM2Q9Y2K5 976 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 PHIPQ8WWQ0 1821 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 UBE4BO95155 1302 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 MAPK13O15264 365 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 GH1P01241 217 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 T-ENOLP0DO92 83 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 IDO1P14902 403 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 NAT1P18440 290 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 CD97P48960 835 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 NEK3P51956 506 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 UBAP2Q5T6F2 1119 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 FBXO25Q8TCJ0 367 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 FAM20AQ96MK3 541 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 ERP44Q9BS26 406 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 FGFBP2Q9BYJ0 223 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 RLFQ13129 1914 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 MSH4O15457 936 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 PABPC4LP0CB38 370 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 STAT3P40763 770 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 CETN2P41208 172 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 MAP7D1Q3KQU3 841 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 TNFAIP8L3Q5GJ75 292 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 DSTYKQ6XUX3 929 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 STMN2Q93045 179 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 ABHD8Q96I13 439 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 MPHOSPH6Q99547 160 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 MYOZ2Q9NPC6 264 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 CLIC5Q9NZA1 410 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZNF180Q9UJW8 692 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 E9PMD0 336 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 NOL4O94818 638 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 EGFRP00533 1210 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 VCAM1P19320 739 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 PTENP60484 403 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 KBTBD2Q8IY47 623 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 CYP2W1Q8TAV3 490 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 PFDN4Q9NQP4 134 aa14.24□□□□□ -0.13
SYNGAP1-204ENST00000449372 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 POTECB2RU33 542 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 NDC80O14777 642 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 MAGEB3O15480 346 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 TLR2O60603 784 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 ASMTLO95671 621 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 PTGER2P43116 358 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 GALK1P51570 392 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 PRELPP51888 382 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 YARSP54577 528 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 TMEM109Q9BVC6 243 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 STK33Q9BYT3 514 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 SNX24Q9Y343 169 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 OPHN1O60890 802 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 NR3C1P04150 777 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 FGFR4P22455 802 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 PTPN4P29074 926 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 SOX5P35711 763 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 DAB2IPQ5VWQ8 1189 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 VSTM1Q6UX27 236 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 RSPH1Q8WYR4 309 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 KRT82Q9NSB4 513 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 DDX43Q9NXZ2 648 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZNF536O15090 1300 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 GCNT3O95395 438 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 HOXA13P31271 388 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 CDR2Q01850 454 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 ACSBG2Q5FVE4 666 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 DUPD1Q68J44 220 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 GRAMD4Q6IC98 578 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 FAM186BQ8IYM0 893 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 SMC6Q96SB8 1091 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 BTBD7Q9P203 1132 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 RPTORQ8N122 1335 aa14.23□□□□□ -0.13
SYNGAP1-204ENST00000449372 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 PSMG1O95456 288 aa14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 RPA1P27694 616 aa14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 GHRHRQ02643 423 aa14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 CYLC2Q14093 348 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 PHLDB3Q6NSJ2 640 aa14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 SLFN11Q7Z7L1 901 aa14.22□□□□□ -0.13
SYNGAP1-204ENST00000449372 BBOF1Q8ND07 529 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms