RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 IKZF4Q9H2S9 585 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 RAB6BQ9NRW1 208 aa7.54□□□□□ -1.2
BEST1-202ENST00000449131 APOBEC2Q9Y235 224 aaKnown RBP7.54□□□□□ -1.2
BEST1-202ENST00000449131 CFAP73A6NFT4 308 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 KCNN4O15554 427 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SLITRK3O94933 977 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 LCP1P13796 627 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 YY1P25490 414 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 GMPSP49915 693 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 KCNA1Q09470 495 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 AP1B1Q10567 949 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 NME3Q13232 169 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 PIGHQ14442 188 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 RBBP5Q15291 538 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 LRRC34Q8IZ02 419 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 ATP8B4Q8TF62 1192 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 ZKSCAN4Q969J2 545 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SMYD3Q9H7B4 428 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SENP1Q9P0U3 644 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 STAP1Q9ULZ2 295 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.2
BEST1-202ENST00000449131 RBP3P10745 1247 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 RRM1P23921 792 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SESN2P58004 480 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 STX1BP61266 288 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 MDH1BQ5I0G3 518 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 CYP4A22Q5TCH4 519 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SLC47A2Q86VL8 602 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 BBS5Q8N3I7 341 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 C1orf131Q8NDD1 294 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 HAS1Q92839 578 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 ROPN1BQ9BZX4 212 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 ROPN1Q9HAT0 212 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 ACP6Q9NPH0 428 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 RYDENQ9NUL5 291 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 GGA3Q9NZ52 723 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 WDR35Q9P2L0 1181 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 MID2Q9UJV3 735 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 CPSF3Q9UKF6 684 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 PPP1R9AQ9ULJ8 1098 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 CHMP2BQ9UQN3 213 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 L3MBTL1Q9Y468 752 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 PPME1Q9Y570 386 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SLIT3O75094 1523 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 GTPBP10A4D1E9 387 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 FAM47DPA6NHR8 397 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 APOL1O14791 398 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 EPHB1P54762 984 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SOX10P56693 466 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 DRP2Q13474 957 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 ART3Q13508 389 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 GRAMD1BQ3KR37 738 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 OTOP1Q7RTM1 612 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 PID1Q7Z2X4 250 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 CDKL3Q8IVW4 592 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 SPATA20Q8TB22 786 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 RBM46Q8TBY0 533 aaKnown RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 LRGUKQ96M69 825 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 GCOM2Q9BZD3 368 aaPredicted RBP7.53□□□□□ -1.2
BEST1-202ENST00000449131 NIF3L1Q9GZT8 377 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 TMBIM4Q9HC24 238 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 BFARQ9NZS9 450 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 SLC12A6Q9UHW9 1150 aa7.53□□□□□ -1.2
BEST1-202ENST00000449131 hCG_2014768A0A024R1R8 64 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 TMEM150BA6NC51 233 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 PFDN6O15212 129 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 GZMAP12544 262 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 MUTP22033 750 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 TYK2P29597 1187 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 ABL2P42684 1182 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 FNTAP49354 379 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 CASP5P51878 434 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 CUL2Q13617 745 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 TAF1BQ53T94 588 aaPredicted RBP7.52□□□□□ -1.2
BEST1-202ENST00000449131 MIIPQ5JXC2 388 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 TRPM8Q7Z2W7 1104 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 ZNF677Q86XU0 584 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 MYLK4Q86YV6 388 aaPredicted RBP7.52□□□□□ -1.2
BEST1-202ENST00000449131 TTC39CQ8N584 583 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 AGBL3Q8NEM8 1001 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 GPRASP2Q96D09 838 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 C17orf75Q9HAS0 396 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 SCOCQ9UIL1 159 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 ANGPTL2Q9UKU9 493 aa7.52□□□□□ -1.2
BEST1-202ENST00000449131 CCT8L1PA6NM43 557 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 KRT10P13645 584 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 KPNA2P52292 529 aaKnown RBP7.52□□□□□ -1.21
BEST1-202ENST00000449131 RBP5P82980 135 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 DDR1Q08345 913 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 ATF7IP2Q5U623 682 aa7.52□□□□□ -1.21
BEST1-202ENST00000449131 LRRC55Q6ZSA7 311 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms