RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ACDQ96AP0 544 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SAAL1Q96ER3 474 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TTPALQ9BTX7 342 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 GTF2IRD1Q9UHL9 959 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCDC88AQ3V6T2 1871 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 SHISA7A6NL88 538 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 H3BM21 787 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 CYB561D2O14569 222 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF202O95125 648 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 TRIM32Q13049 653 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 STILQ15468 1287 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA1755Q5JYT7 1200 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 BSPRYQ5W0U4 402 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATCAYQ86WG3 371 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZSCAN18Q8TBC5 510 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 ERCC4Q92889 916 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 IL17RBQ9NRM6 502 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 MON2Q7Z3U7 1717 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 DOT1LQ8TEK3 1739 aa5.98□□□□□ -1.45
CDC42BPA-209ENST00000448940 DTNBO60941 627 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 KATNA1O75449 491 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 VCLP18206 1134 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 RPA1P27694 616 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PAFAH1B1P43034 410 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 LHX1P48742 406 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ACOT2P49753 483 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SEMG2Q02383 582 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ASIC2Q16515 512 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF618Q5T7W0 954 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 LPCAT2Q7L5N7 544 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF557Q8N988 423 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 NELFBQ8WX92 580 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 IRF7Q92985 503 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SELENOOQ9BVL4 669 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SRRTQ9BXP5 876 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SIK2Q9H0K1 926 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 NEUROD4Q9HD90 331 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM86C1Q9NVL1 165 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GIT1Q9Y2X7 761 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 COL1A2P08123 1366 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBXAS1P24557 533 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MARSP56192 900 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GRIK3Q13003 919 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPP4R3CPQ6ZMV5 832 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATL2Q8NHH9 583 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 LRCH3Q96II8 777 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 INPP4AQ96PE3 977 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 NELL2Q99435 816 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 IL12RB2Q99665 862 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM105AQ9NUU6 356 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 INVSQ9Y283 1065 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHF20L1A8MW92 1017 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PITPNM1O00562 1244 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 KDM1AO60341 852 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 RPN1P04843 607 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ERVK-10P10266 1014 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TERF1P54274 439 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDH8P55286 799 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHOSPHO2Q8TCD6 241 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPR152Q8TDT2 470 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CPED1A4D0V7 1026 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 A6NCN8 305 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CYBAP13498 195 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 POLR2EP19388 210 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDC25CP30307 473 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 WASP42768 502 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SLC11A2P49281 568 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SLC39A14Q15043 492 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 WDR45BQ5MNZ6 344 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHF19Q5T6S3 580 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPR158Q5T848 1215 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 THEMIS2Q5TEJ8 643 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TAF3Q5VWG9 929 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CASC4Q6P4E1 433 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MOCOSQ96EN8 888 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 DCUN1D1Q96GG9 259 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CPB2Q96IY4 423 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PURBQ96QR8 312 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 OSGEPL1Q9H4B0 414 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SNTG2Q9NY99 539 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TNFSF13BQ9Y275 285 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3DA0A087WVF3 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3IA0A087WXS9 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3EA0A087X179 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3KA0A087X1G2 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3FA6NER0 549 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3LB9A6J9 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 SLC26A4O43511 780 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D3HP0C7X1 549 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MCF2P10911 925 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 ESRRAP11474 423 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 MUTP22033 750 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 AKAP5P24588 427 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 GJA5P36382 358 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 PEX6Q13608 980 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 EXOC3L4Q17RC7 722 aa5.97□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAXCQ5TGI0 409 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms