RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MLLT6P55198 1093 aaPredicted RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 PPP2R3AQ06190 1150 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 MTAPQ13126 283 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 MAPK7Q13164 816 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 IL17AQ16552 155 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 SEZ6Q53EL9 994 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 ARL6IP4Q66PJ3 421 aaKnown RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 RNF19BQ6ZMZ0 732 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 MAP4K3Q8IVH8 894 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 CD302Q8IX05 232 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 HS6ST3Q8IZP7 471 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 CELF5Q8N6W0 485 aaKnown RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 ZSCAN18Q8TBC5 510 aaPredicted RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 CSGALNACT1Q8TDX6 532 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 MSANTD3Q96H12 275 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 EPC1Q9H2F5 836 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 DLL3Q9NYJ7 618 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 CEP72Q9P209 647 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 ASB3Q9Y575 518 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 FAM186AA6NE01 2351 aa14.47□□□□□ -0.09
HMGB3-204ENST00000448905 RIF1Q5UIP0 2472 aaKnown RBP14.47□□□□□ -0.09
HMGB3-204ENST00000448905 DPYSL4O14531 572 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 SLC26A4O43511 780 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 CCR3P51677 355 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 EPHA5P54756 1037 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 LMNB2Q03252 620 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 GPR17Q13304 367 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 FZD5Q13467 585 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 RSPO4Q2I0M5 234 aaPredicted RBP14.46□□□□□ -0.09
HMGB3-204ENST00000448905 HYIQ5T013 277 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 KCNK18Q7Z418 384 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 HAUS6Q7Z4H7 955 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 NELL1Q92832 810 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 CALML4Q96GE6 196 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 ZSWIM3Q96MP5 696 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 MMTAG2Q9BU76 263 aaKnown RBP14.46□□□□□ -0.09
HMGB3-204ENST00000448905 RPF1Q9H9Y2 349 aaKnown RBP14.46□□□□□ -0.09
HMGB3-204ENST00000448905 GMEB2Q9UKD1 530 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 PIAS3Q9Y6X2 628 aa14.46□□□□□ -0.09
HMGB3-204ENST00000448905 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 TTC26A0AVF1 554 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 VWA3AA6NCI4 1184 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 LILRB5O75023 590 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 FCARP24071 287 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 UBA7P41226 1012 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 VIPR2P41587 438 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 CCR2P41597 374 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 CXCL12P48061 93 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 TUFMP49411 452 aaKnown RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 KPNA1P52294 538 aaPredicted RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 DUSP4Q13115 394 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 LRRC32Q14392 662 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 ZBTB6Q15916 424 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 TSSK4Q6SA08 328 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 VITQ6UXI7 678 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 ITIH5Q86UX2 942 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 MYCT1Q8N699 235 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 BEST2Q8NFU1 509 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 FAM200AQ8TCP9 573 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 AK8Q96MA6 479 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 PLIN2Q99541 437 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 CHRDQ9H2X0 955 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 C8orf33Q9H7E9 229 aaPredicted RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 PRMT8Q9NR22 394 aaPredicted RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 TUBGCP4Q9UGJ1 667 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 ODF2LQ9ULJ1 636 aa14.45□□□□□ -0.1
HMGB3-204ENST00000448905 SMG5Q9UPR3 1016 aaKnown RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 TIMM13Q9Y5L4 95 aaPredicted RBP14.45□□□□□ -0.1
HMGB3-204ENST00000448905 MED19A0JLT2 244 aaPredicted RBP14.44□□□□□ -0.1
HMGB3-204ENST00000448905 HEPACAM2A8MVW5 462 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 LACTBL1A8MY62 500 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 HNRNPDLO14979 420 aaKnown RBP14.44□□□□□ -0.1
HMGB3-204ENST00000448905 OGTO15294 1046 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 CHADO15335 359 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 KRT18P05783 430 aaKnown RBP14.44□□□□□ -0.1
HMGB3-204ENST00000448905 CXCL8P10145 99 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 TYMPP19971 482 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 CCNE1P24864 410 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 SLC12A3P55017 1021 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 SPAG1Q07617 926 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 PTPAQ15257 358 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 TEAD2Q15562 447 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 TAF12Q16514 161 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 ARHGAP15Q53QZ3 475 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 OVOS1Q6IE37 1185 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 PGLYRP2Q96PD5 576 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
HMGB3-204ENST00000448905 HSFX1Q9UBD0 423 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 TBX20Q9UMR3 447 aa14.44□□□□□ -0.1
HMGB3-204ENST00000448905 A0A1W2PRU2 124 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 FAM13AO94988 1023 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 ODC1P11926 461 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 GJA1P17302 382 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 CNR2P34972 360 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 NCKAP1LP55160 1127 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 LILRA4P59901 499 aa14.43□□□□□ -0.1
HMGB3-204ENST00000448905 CENPPQ6IPU0 288 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms