RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 EFEMP2O95967 443 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 SERPINC1P01008 464 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 SLC9A1P19634 815 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 DNAJB1P25685 340 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 TAF6P49848 677 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 KLK7P49862 253 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 ZNF699Q32M78 642 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 LRRC52Q8N7C0 313 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 INTS2Q9H0H0 1204 aaKnown RBP12.75□□□□□ -0.37
RCL1-208ENST00000448872 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 NXF1Q9UBU9 619 aaKnown RBP12.75□□□□□ -0.37
RCL1-208ENST00000448872 COQ4Q9Y3A0 265 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 PDE4DIPQ5VU43 2346 aa12.75□□□□□ -0.37
RCL1-208ENST00000448872 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 GRM6O15303 877 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 ASS1P00966 412 aaKnown RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 TKTP29401 623 aaKnown RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 AARSP49588 968 aaKnown RBP eCLIP12.74□□□□□ -0.37
RCL1-208ENST00000448872 FUT10Q6P4F1 479 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 SCARA5Q6ZMJ2 495 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 TATDN2Q93075 761 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 TMEM169Q96HH4 297 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 SENP8Q96LD8 212 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 PCDHGC5Q9Y5F6 944 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.74□□□□□ -0.37
RCL1-208ENST00000448872 SNX9Q9Y5X1 595 aa12.74□□□□□ -0.37
RCL1-208ENST00000448872 A0A1B0GTH6 734 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 CYB561D2O14569 222 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 PMM2O15305 246 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 P4HA2O15460 535 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 TPM2P07951 284 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 PON1P27169 355 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 ATICP31939 592 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 PPM1AP35813 382 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 PNPLA4P41247 253 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 NOP14P78316 857 aaKnown RBP12.73□□□□□ -0.37
RCL1-208ENST00000448872 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 UBXN1Q04323 297 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 MYO1EQ12965 1108 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 WDR72Q3MJ13 1102 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SV2CQ496J9 727 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 RTP2Q5QGT7 225 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 CEP57Q86XR8 500 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
RCL1-208ENST00000448872 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 GDPD5Q8WTR4 605 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 KAT5Q92993 513 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SUSD3Q96L08 255 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 ARID3AQ99856 593 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SDCBP2Q9H190 292 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 ZNF576Q9H609 170 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 RWDD3Q9Y3V2 267 aa12.73□□□□□ -0.37
RCL1-208ENST00000448872 SF3B1O75533 1304 aaKnown RBP eCLIP12.73□□□□□ -0.379e-6■■■■■ 51.3
RCL1-208ENST00000448872 HCRTO43612 131 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 ASPAP45381 313 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 CDH8P55286 799 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 UBASH3AP57075 661 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 GPM6BQ13491 265 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 CAMK1Q14012 370 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 NR1I3Q14994 352 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SYCP1Q15431 976 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 WSCD1Q658N2 575 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 DPY19L2P1Q6NXN4 242 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 GBP6Q6ZN66 633 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 DDX53Q86TM3 631 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 POF1BQ8WVV4 589 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 MRPL45Q9BRJ2 306 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 C11orf84Q9BUA3 381 aaPredicted RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
RCL1-208ENST00000448872 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
RCL1-208ENST00000448872 SIX2Q9NPC8 291 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms