RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NPAS3Q8IXF0 933 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 DAW1Q8N136 415 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 DDX12PQ92771 950 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 TIGD1Q96MW7 591 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 REEP2Q9BRK0 252 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 DDX23Q9BUQ8 820 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 BCO2Q9BYV7 579 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 MAFFQ9ULX9 164 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 MYH11P35749 1972 aa14.96□□□□□ -0.01
PDLIM2-213ENST00000448520 FANCMQ8IYD8 2048 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 SFI1A8K8P3 1242 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 PODXLO00592 558 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF197O14709 1029 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 NCAM2O15394 837 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 TBC1D4O60343 1298 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 ECI2O75521 394 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 MICAL2O94851 1124 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 LRG1P02750 347 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 RHOP08100 348 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 SP9P0CG40 484 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 ATF2P15336 505 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 PROZP22891 400 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 ID4P47928 161 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 OSTNP61366 133 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 STRN3Q13033 797 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 MAPK7Q13164 816 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 MRPL58Q14197 206 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 POSTNQ15063 836 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 KLHL40Q2TBA0 621 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 VARS2Q5ST30 1063 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 TPGS2Q68CL5 300 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 MPZL3Q6UWV2 235 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 CEP120Q8N960 986 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 C3orf58Q8NDZ4 430 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 ST13P5Q8NFI4 369 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 DNAJC19Q96DA6 116 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 FOXQ1Q9C009 403 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 TRIM9Q9C026 710 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 TNMDQ9H2S6 317 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 HCFC1R1Q9NWW0 138 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 CNTN3Q9P232 1028 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 NUB1Q9Y5A7 615 aa14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-213ENST00000448520 MIA3Q5JRA6 1907 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 FAM170BA6NMN3 283 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 I3L4J1 428 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 PRRG1O14668 218 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 TOM1L1O75674 476 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 GLULP15104 373 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 PTMSP20962 102 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 GUCY2CP25092 1073 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 ASIC1P78348 528 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 ROR1Q01973 937 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 SOX4Q06945 474 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 DPYDQ12882 1025 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF528Q3MIS6 628 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 TAS1R3Q7RTX0 852 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 TCEAL8Q8IYN2 117 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 APPL2Q8NEU8 664 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 MCRS1Q96EZ8 462 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 ZMAT2Q96NC0 199 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 C7orf25Q9BPX7 421 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 ZHX3Q9H4I2 956 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 MAGEF1Q9HAY2 307 aa14.94□□□□□ -0.02
PDLIM2-213ENST00000448520 WDR27A2RRH5 827 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 SLC16A4O15374 487 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 KLRC4O43908 158 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 IDEP14735 1019 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 UBXN2BQ14CS0 331 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 ZBTB41Q5SVQ8 909 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 ZPBP2Q6X784 338 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 ELMOD1Q8N336 334 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 ELSPBP1Q96BH3 223 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 KXD1Q9BQD3 176 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 PLEKHA5Q9HAU0 1116 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 CYP4F11Q9HBI6 524 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 KCND2Q9NZV8 630 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 FBXO4Q9UKT5 387 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 MRPS17Q9Y2R5 130 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 R4GN57 208 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 OTOGLQ3ZCN5 2332 aa14.93□□□□□ -0.02
PDLIM2-213ENST00000448520 H0YCG3 227 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ABLIM1O14639 778 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 CLDN3O15551 220 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 LAMTOR5O43504 91 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 PLS3P13797 630 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ARPP19P56211 112 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 SLC10A6Q3KNW5 377 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 CTXN3Q4LDR2 81 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 CCDC183Q5T5S1 534 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 CYP4A22Q5TCH4 519 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ISM2Q6H9L7 571 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms