RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PDXDC1Q6P996 788 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 KREMEN1Q96MU8 473 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 UROC1Q96N76 676 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.96■□□□□ 0.95
SGCE-207ENST00000447873 CACNG4Q9UBN1 327 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 MYO6Q9UM54 1294 aa20.96■□□□□ 0.95
SGCE-207ENST00000447873 DGKIO75912 1065 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 DDHD2O94830 711 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 TAF6P49848 677 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 JAM2P57087 298 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 TNNC1P63316 161 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 UPP1Q16831 310 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 SV2CQ496J9 727 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 ZNF280BQ86YH2 543 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 FAXDC2Q96IV6 333 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 PANX2Q96RD6 677 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 ARID3AQ99856 593 aa20.95■□□□□ 0.94
SGCE-207ENST00000447873 F8VZ95 297 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 STAT1P42224 750 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 DSC1Q08554 894 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 SFMBT2Q5VUG0 894 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 FAM117BQ6P1L5 589 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 SCARA5Q6ZMJ2 495 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 TMCO2Q7Z6W1 182 aaPredicted RBP20.94■□□□□ 0.94
SGCE-207ENST00000447873 RABGGTAQ92696 567 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 JAKMIP2Q96AA8 810 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 DNAJC7Q99615 494 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 PAAF1Q9BRP4 392 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 ZNHIT6Q9NWK9 470 aaKnown RBP20.94■□□□□ 0.94
SGCE-207ENST00000447873 POLIQ9UNA4 740 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 SNX9Q9Y5X1 595 aa20.94■□□□□ 0.94
SGCE-207ENST00000447873 KPNA7A9QM74 516 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 ASPAP45381 313 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 LILRA4P59901 499 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 PAN2Q504Q3 1202 aaKnown RBP20.93■□□□□ 0.94
SGCE-207ENST00000447873 LRRC8AQ8IWT6 810 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 COLGALT2Q8IYK4 626 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 LRRC43Q8N309 656 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 MMS19Q96T76 1030 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 GPR88Q9GZN0 384 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 PTPRSQ13332 1948 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 FOXN3O00409 490 aaPredicted RBP20.93■□□□□ 0.94
SGCE-207ENST00000447873 B3GAT3O94766 335 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 SOX5P35711 763 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 USP8P40818 1118 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 FMNL3Q8IVF7 1028 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 HERVK_113Q902F9 699 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 SHC3Q92529 594 aa20.93■□□□□ 0.94
SGCE-207ENST00000447873 SYN2Q92777 582 aaPredicted RBP20.93■□□□□ 0.94
SGCE-207ENST00000447873 CXXC1Q9P0U4 656 aaPredicted RBP20.93■□□□□ 0.94
SGCE-207ENST00000447873 SPTLC1O15269 473 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 B4GALT3O60512 393 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 WEE2P0C1S8 567 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 PNMA6AP0CW24 399 aaPredicted RBP20.92■□□□□ 0.94
SGCE-207ENST00000447873 OR1G1P47890 313 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 YWHAEP62258 255 aaKnown RBP20.92■□□□□ 0.94
SGCE-207ENST00000447873 ARID5AQ03989 594 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 DCLRE1AQ6PJP8 1040 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 BCO2Q9BYV7 579 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
SGCE-207ENST00000447873 SMYD3Q9H7B4 428 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 NRDE2Q9H7Z3 1164 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 GDAP2Q9NXN4 497 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 AIPL1Q9NZN9 384 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 DNAJB4Q9UDY4 337 aa20.92■□□□□ 0.94
SGCE-207ENST00000447873 NRDCO43847 1150 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 GFPT2O94808 682 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 KRT5P13647 590 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 CD58P19256 250 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 HNRNPH3P31942 346 aaKnown RBP20.91■□□□□ 0.94
SGCE-207ENST00000447873 ASIC2Q16515 512 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 GPIHBP1Q8IV16 184 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 C3orf58Q8NDZ4 430 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 ZNF689Q96CS4 500 aaPredicted RBP20.91■□□□□ 0.94
SGCE-207ENST00000447873 CYP3A43Q9HB55 503 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 SLC4A7Q9Y6M7 1214 aa20.91■□□□□ 0.94
SGCE-207ENST00000447873 CCDC172P0C7W6 258 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 FERP16591 822 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 ACO1P21399 889 aaKnown RBP20.9■□□□□ 0.94
SGCE-207ENST00000447873 RAP1GAPP47736 663 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 CDH8P55286 799 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 E4F1Q66K89 784 aaPredicted RBP20.9■□□□□ 0.94
SGCE-207ENST00000447873 TRIM44Q96DX7 344 aaPredicted RBP20.9■□□□□ 0.94
SGCE-207ENST00000447873 YME1L1Q96TA2 773 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 BAG1Q99933 345 aaPredicted RBP20.9■□□□□ 0.94
SGCE-207ENST00000447873 CISHQ9NSE2 258 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 PRG3Q9Y2Y8 225 aaPredicted RBP20.9■□□□□ 0.94
SGCE-207ENST00000447873 PCDHB4Q9Y5E5 795 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 CEP290O15078 2479 aa20.9■□□□□ 0.94
SGCE-207ENST00000447873 HUS1O60921 280 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 KIF4AO95239 1232 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 GJB5O95377 273 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 ALDH2P05091 517 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 PAX3P23760 479 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 BTG3Q14201 252 aaPredicted RBP20.89■□□□□ 0.94
SGCE-207ENST00000447873 WDR59Q6PJI9 974 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 TMEM270Q6UE05 265 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 DSTYKQ6XUX3 929 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 FAM71AQ8IYT1 594 aa20.89■□□□□ 0.94
SGCE-207ENST00000447873 CMTR2Q8IYT2 770 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms