RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 H7C4K7 107 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 SYN3O14994 580 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 CDC45O75419 566 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 SLITRK3O94933 977 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 LYPLA2O95372 231 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 CAVIN2O95810 425 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TOP3BO95985 862 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 GCFC2P16383 781 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 IGFBP6P24592 240 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 HOXC13P31276 330 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 PXNP49023 591 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TWF1Q12792 350 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 MRPL58Q14197 206 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 KARSQ15046 597 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 PON2Q15165 354 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 PTPAQ15257 358 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TEAD2Q15562 447 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 ADCK5Q3MIX3 580 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 CDCA2Q69YH5 1023 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 GALNT17Q6IS24 598 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 BLIDQ8IZY5 108 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 FBXL16Q8N461 479 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 DAGLBQ8NCG7 672 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 KCNB2Q92953 911 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 RSPRY1Q96DX4 576 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 DYDC2Q96IM9 177 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TMEM209Q96SK2 561 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 ADPGKQ9BRR6 497 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 SLC26A6Q9BXS9 759 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 CXCL16Q9H2A7 254 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 PDZD7Q9H5P4 517 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TMEM9BQ9NQ34 198 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 ANKEF1Q9NU02 776 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 OBP2AQ9NY56 170 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 CEP72Q9P209 647 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 AFF4Q9UHB7 1163 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 COL4A2P08572 1712 aa7.8□□□□□ -1.16
LRRC28-203ENST00000447360 TDRD15B5MCY1 1934 aaKnown RBP7.8□□□□□ -1.16
LRRC28-203ENST00000447360 LRRIQ4A6NIV6 560 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
LRRC28-203ENST00000447360 MYL4P12829 197 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 GJA1P17302 382 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 BRCC3P46736 316 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 ARPP19P56211 112 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 CYP4A11Q02928 519 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 CREB5Q02930 508 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 PRPF4BQ13523 1007 aaKnown RBP7.79□□□□□ -1.16
LRRC28-203ENST00000447360 CTTNQ14247 550 aaKnown RBP7.79□□□□□ -1.16
LRRC28-203ENST00000447360 MCM6Q14566 821 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 INF2Q27J81 1249 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 KRT25Q7Z3Z0 450 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 NOSTRINQ8IVI9 506 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 ARID3BQ8IVW6 561 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-203ENST00000447360 ZBTB8OSQ8IWT0 167 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 TPH2Q8IWU9 490 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 C3orf58Q8NDZ4 430 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 HAS1Q92839 578 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 HSD17B14Q9BPX1 270 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 POLR3FQ9H1D9 316 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-203ENST00000447360 C2orf40Q9H1Z8 148 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 GTSE1Q9NYZ3 720 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 FBXL5Q9UKA1 691 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 TPCN1Q9ULQ1 816 aa7.79□□□□□ -1.16
LRRC28-203ENST00000447360 A0A1W2PRU2 124 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 FAM221BA6H8Z2 402 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 H0Y626 953 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 I3L4J1 428 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 ACKR2O00590 384 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 CDX4O14627 284 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 TRIM16O95361 564 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 PRKCBP05771 671 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 WEE1P30291 646 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 RARRES1P49788 294 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 GRSF1Q12849 480 aaKnown RBP eCLIP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 NPY5RQ15761 445 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 MAPK6Q16659 721 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 ITPRIPL2Q3MIP1 535 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 DCAF4L1Q3SXM0 396 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 CTXN3Q4LDR2 81 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 SOWAHCQ53LP3 525 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 TMEM196Q5HYL7 178 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 ERICH6BQ5W0A0 696 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 NCAPH2Q6IBW4 605 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 PKN3Q6P5Z2 889 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 Q6ZUG5 572 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 NEK8Q86SG6 692 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 C11orf74Q86VG3 221 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 PROSER1Q86XN7 944 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 TRIM22Q8IYM9 498 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 TTC8Q8TAM2 541 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 BRF1Q92994 677 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 CCDC43Q96MW1 224 aaKnown RBP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 LRRC3BQ96PB8 259 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 NAP1L4Q99733 375 aaKnown RBP7.78□□□□□ -1.16
LRRC28-203ENST00000447360 LRRC3Q9BY71 257 aa7.78□□□□□ -1.16
LRRC28-203ENST00000447360 SLC32A1Q9H598 525 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms