RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TOGARAM2Q6ZUX3 1019 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 SRLQ86TD4 932 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 FITM2Q8N6M3 262 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 MB21D1Q8N884 522 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 RNF169Q8NCN4 708 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 OR10H5Q8NGA6 315 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 OR6B3Q8NGW1 331 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 MORC4Q8TE76 937 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 DDX17Q92841 729 aaKnown RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 P2RX7Q99572 595 aaKnown RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 DPH1Q9BZG8 443 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 UNKQ9C0B0 810 aaKnown RBP5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 ADAM7Q9H2U9 754 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 GPR35Q9HC97 309 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 POGKQ9P215 609 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 SNX13Q9Y5W8 968 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 CCNB3Q8WWL7 1395 aa5.36□□□□□ -1.55
HMGB1P16-201ENST00000447155 HECW1Q76N89 1606 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 FHAD1B1AJZ9 1412 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 CDHR4A6H8M9 788 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 PATE3B3GLJ2 98 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 RASA4BC9J798 803 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 RASA4O43374 803 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 RRP9O43818 475 aaKnown RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 PRICKLE3O43900 615 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 THP07101 528 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SLC6A2P23975 617 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 PHKA1P46020 1223 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 PRIM2P49643 509 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SUMO3P55854 103 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZNF783Q6ZMS7 281 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 LIMS2Q7Z4I7 341 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SPICE1Q8N0Z3 855 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 ACRBPQ8NEB7 543 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 TBC1D15Q8TC07 691 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SCAMP4Q969E2 229 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZC3H10Q96K80 434 aaKnown RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 MSLNLQ96KJ4 702 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 CCDC138Q96M89 665 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SSBP3Q9BWW4 388 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 CPNE7Q9UBL6 633 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 TAGLN3Q9UI15 199 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 CORO2BQ9UQ03 480 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 PAXBP1Q9Y5B6 917 aa5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P16-201ENST00000447155 BIVM-ERCC5R4GMW8 1640 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 TIAM1Q13009 1591 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 NCOA2Q15596 1464 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 SOGA1O94964 1423 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZBED9Q6R2W3 1325 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 DRGXA6NNA5 263 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZNF785A8K8V0 405 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 CAPN14A8MX76 684 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 KPNA5O15131 536 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 CYP27B1O15528 508 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 AGFG2O95081 481 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 CHEK2O96017 543 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 HK1P19367 917 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 COMTP21964 271 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 SERPINB3P29508 390 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 PSMC1P62191 440 aaKnown RBP5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 ZNF543Q08ER8 600 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 LONRF3Q496Y0 759 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 MAMDC4Q6UXC1 1216 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 MED25Q71SY5 747 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 DNERQ8NFT8 737 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 NMD3Q96D46 503 aaKnown RBP5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 FAM89AQ96GI7 184 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 SIK2Q9H0K1 926 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 PNPLA8Q9NP80 782 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 STK32BQ9NY57 414 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 SRRDQ9UH36 339 aa5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 AFF4Q9UHB7 1163 aaKnown RBP5.34□□□□□ -1.55
HMGB1P16-201ENST00000447155 CNTLNQ9NXG0 1405 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 PLEKHD1A6NEE1 506 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 BTN3A1O00481 513 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ZNF623O75123 536 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 IL18RAPO95256 599 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ABHD16AO95870 558 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ITGB3P05106 788 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ITGB1P05556 798 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 GCSHP23434 173 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 ZNF135P52742 658 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 CHN2P52757 468 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 RABGGTBP53611 331 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 MXRA7P84157 204 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 DAG1Q14118 895 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SLC44A4Q53GD3 710 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 C1QL3Q5VWW1 255 aa5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 NAIF1Q69YI7 327 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P16-201ENST00000447155 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms