RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PREBQ9HCU5 417 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 SALL1Q9NSC2 1324 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TRMUO75648 421 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 RNF34Q969K3 372 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 SPATA16Q9BXB7 569 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 BHMT2Q9H2M3 363 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 PARVBQ9HBI1 364 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TNFAIP8O95379 198 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 CCDC189A1A4V9 331 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 GOLGA8IPA6NC78 632 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 GOLGA8JA6NMD2 632 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 UFL1O94874 794 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 DUSP9Q99956 384 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 C11orf70Q9BRQ4 267 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 MYRFQ9Y2G1 1151 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 FOXO4P98177 505 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TMEM47Q9BQJ4 181 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TBKBP1A7MCY6 615 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ZBTB39O15060 712 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 P4HA2O15460 535 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 SLC9A1P19634 815 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 TAC1P20366 129 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 GCOM2Q9BZD3 368 aaPredicted RBP8.26□□□□□ -1.09
SMG1-202ENST00000446231 GRIN2DO15399 1336 aa8.26□□□□□ -1.09
SMG1-202ENST00000446231 RALAP11233 206 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 MFSD5Q6N075 450 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZCCHC7Q8N3Z6 543 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 EPAS1Q99814 870 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CFAP99D6REC4 459 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SPAG6O75602 509 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 ALCAMQ13740 583 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 XKR9Q5GH70 373 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TMEM270Q6UE05 265 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ARHGEF3Q9NR81 526 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 VAMP7P51809 220 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 PPP1R36Q96LQ0 422 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 FAM111AQ96PZ2 611 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 THAP2Q9H0W7 228 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TLR3O15455 904 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 KHDC1Q4VXA5 237 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 TRIM72Q6ZMU5 477 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 DHX36Q9H2U1 1008 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 TTC37Q6PGP7 1564 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 RTP1P59025 263 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZNF12P17014 697 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SYCP2LQ5T4T6 812 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZNF572Q7Z3I7 529 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 RTKN2Q8IZC4 609 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 XXYLT1Q8NBI6 393 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TMA16Q96EY4 203 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 KIAA0100Q14667 2235 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 TBC1D12O60347 775 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 JAK1P23458 1154 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 NT5C2P49902 561 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ROR1Q01973 937 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ATG4AQ8WYN0 398 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TMEM260Q9NX78 707 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ICE1Q9Y2F5 2266 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ASMTLO95671 621 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 WEE2P0C1S8 567 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 IL1RL1Q01638 556 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ULK2Q8IYT8 1036 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 CEP170Q5SW79 1584 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 LYNP07948 512 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TYK2P29597 1187 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SLC16A2P36021 539 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 MAP3K7CLP57077 242 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TMC5Q6UXY8 1006 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 DHDDSQ86SQ9 333 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CATSPER3Q86XQ3 398 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SLC30A5Q8TAD4 765 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 LIG4P49917 911 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SHCBP1LQ9BZQ2 653 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CD209Q9NNX6 404 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 POLR1AO95602 1720 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 A0A087X0B3 334 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 A6NJR5 290 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CAMTA2O94983 1202 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 MAPRE2Q15555 327 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 C4orf50Q6ZRC1 276 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZSCAN18Q8TBC5 510 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 MKNK1Q9BUB5 465 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ARL8BQ9NVJ2 186 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZFP1Q6P2D0 407 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 BORCS5Q969J3 196 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CDC42EP4Q9H3Q1 356 aaKnown RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 ALADP13716 330 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 BGNP21810 368 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 GJB7Q6PEY0 223 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 BNC2Q6ZN30 1099 aaPredicted RBP8.25□□□□□ -1.09
SMG1-202ENST00000446231 ZCCHC9Q8N567 271 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms