RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 LRFN1Q9P244 771 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 USP15Q9Y4E8 981 aaPredicted RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 PIAS3Q9Y6X2 628 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 A4D1N5 150 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 C16orf96A6NNT2 1141 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 WDR64B1ANS9 1081 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 H0YIV9 168 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 GFRA2O00451 464 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CXCL11O14625 94 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 TLL1O43897 1013 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CKBP12277 381 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SCAND1P57086 179 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 ACTR1AP61163 376 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 NKX3-2P78367 333 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 MC1RQ01726 317 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 LBRQ14739 615 aaKnown RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 DLGAP5Q15398 846 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SLC25A24Q6NUK1 477 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CLEC2AQ6UVW9 174 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 KCNK18Q7Z418 384 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 HID1Q8IV36 788 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SCML4Q8N228 414 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 MIER2Q8N344 545 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 DPP10Q8N608 796 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 FAM184AQ8NB25 1140 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 GPR150Q8NGU9 434 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 TBC1D22AQ8WUA7 517 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 DEPDC1BQ8WUY9 529 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CMTM3Q96MX0 182 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 STMN4Q9H169 189 aaPredicted RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 MVB12BQ9H7P6 319 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 BRF2Q9HAW0 419 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 PARVGQ9HBI0 331 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SEMA3GQ9NS98 782 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.25□□□□□ -1.73
UBR3-206ENST00000444475 GDAP2Q9NXN4 497 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CALCOCO1Q9P1Z2 691 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 TTC41PQ6P2S7 1318 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 TMCO5BA8MYB1 307 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 H0YAE9 185 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 MYO1FO00160 1098 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 ARVCFO00192 962 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 GPRIN2O60269 458 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 LILRA1O75019 489 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 HTR3BO95264 441 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 EGFRP00533 1210 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 NPPAP01160 153 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 GALTP07902 379 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 IL13P35225 146 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CCR9P51686 369 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 RAC3P60763 192 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CYP4F3Q08477 520 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 NFRKBQ6P4R8 1299 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CCDC62Q6P9F0 684 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SHQ1Q6PI26 577 aaKnown RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 CENPQQ7L2Z9 268 aaPredicted RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 MRPL10Q7Z7H8 261 aaKnown RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 BPHLQ86WA6 291 aaPredicted RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 CHD1LQ86WJ1 897 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 LIX1LQ8IVB5 337 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CDH26Q8IXH8 852 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 FAM71BQ8TC56 605 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 ACMSDQ8TDX5 336 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 TEKT4Q8WW24 435 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 PMEPA1Q969W9 287 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 MAGEB10Q96LZ2 347 aaPredicted RBP4.25□□□□□ -1.73
UBR3-206ENST00000444475 ACAP3Q96P50 834 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 CGRRF1Q99675 332 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 SYT17Q9BSW7 474 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 NACAP1Q9BZK3 213 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 BRD8Q9H0E9 1235 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 PCDHGA5Q9Y5G8 931 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 PCDHGA1Q9Y5H4 931 aa4.25□□□□□ -1.73
UBR3-206ENST00000444475 G3V3G9 751 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 APOL1O14791 398 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 SCAMP1O15126 338 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ZPR1O75312 459 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CDKL5O76039 1030 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ACTN1P12814 892 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 ABCG1P45844 678 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CAP1Q01518 475 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 GRSF1Q12849 480 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBR3-206ENST00000444475 BMPR2Q13873 1038 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MAPKAPK3Q16644 382 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 XKR9Q5GH70 373 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 C12orf60Q5U649 245 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 PXKQ7Z7A4 578 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CCDC65Q8IXS2 484 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 NIPA2Q8N8Q9 360 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MDM1Q8TC05 714 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 BCAS4Q8TDM0 211 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 BTBD6Q96KE9 485 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 FAM167AQ96KS9 214 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBR3-206ENST00000444475 C11orf16Q9NQ32 467 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 HPS4Q9NQG7 708 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 MBIPQ9NS73 344 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 APPL1Q9UKG1 709 aa4.24□□□□□ -1.73
UBR3-206ENST00000444475 CLEC4AQ9UMR7 237 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms