RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 DGUOKQ16854 277 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TRAPPC3LQ5T215 181 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 LRRC8EQ6NSJ5 796 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ARPINQ7Z6K5 226 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ZBED8Q8IZ13 594 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 APOL4Q9BPW4 351 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 TMEM120AQ9BXJ8 343 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CEP44Q9C0F1 390 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 LACRTQ9GZZ8 138 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 GPAMQ9HCL2 828 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 MRPL47Q9HD33 250 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 IARS2Q9NSE4 1012 aaKnown RBP5.4□□□□□ -1.54
SCN11A-202ENST00000444237 ETNK2Q9NVF9 386 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 UVRAGQ9P2Y5 699 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 PCDHGA4Q9Y5G9 962 aa5.4□□□□□ -1.54
SCN11A-202ENST00000444237 CPS1P31327 1500 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 SMCO2A6NFE2 343 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 KIF28PB7ZC32 967 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 TRIM24O15164 1050 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ENO2P09104 434 aaPredicted RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 RAG1P15918 1043 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 KRT20P35900 424 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ARHGDIAP52565 204 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 TRAF2Q12933 501 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF394Q53GI3 561 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 HP1BP3Q5SSJ5 553 aaPredicted RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 GIMAP8Q8ND71 665 aaPredicted RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 OR9Q1Q8NGQ5 310 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 MXD3Q9BW11 206 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 BRIP1Q9BX63 1249 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ARHGEF10LQ9HCE6 1279 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ATP8A2Q9NTI2 1148 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 FBXO28Q9NVF7 368 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 STK39Q9UEW8 545 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 DOLKQ9UPQ8 538 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 RBMX2Q9Y388 322 aaKnown RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 A8MUI8 341 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 F8W8V4 182 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 GSTA4O15217 222 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 RAD51BO15315 384 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 MMP13P45452 471 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 MFAP3P55082 362 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 PDIA2Q13087 525 aaKnown RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 KLHL12Q53G59 568 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 ARMCX4Q5H9R4 360 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 PRR23BQ6ZRT6 265 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 FAM196AQ6ZSG2 479 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 COPS6Q7L5N1 327 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 DEPTORQ8TB45 409 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 DEPDC1BQ8WUY9 529 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 RBM15Q96T37 977 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 SETDB2Q96T68 719 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 KLC2Q9H0B6 622 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 PICK1Q9NRD5 415 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.55
SCN11A-202ENST00000444237 MOSPD1Q9UJG1 213 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 HPSEQ9Y251 543 aa5.4□□□□□ -1.55
SCN11A-202ENST00000444237 DEPDC5O75140 1603 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TRPM1Q7Z4N2 1603 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 USP42Q9H9J4 1324 aaKnown RBP5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PVALEFA0A1B0GWK0 134 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 A6NHS1 94 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PDZK1P1A8MUH7 402 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 DDX3XO00571 662 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCN11A-202ENST00000444237 KRT1P04264 644 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 LDHCP07864 332 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 NUDT17P0C025 328 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PSMC2P35998 433 aaKnown RBP5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TECP42680 631 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 MEI1Q5TIA1 1274 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TBC1D9BQ66K14 1250 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PPP4R4Q6NUP7 873 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 C6orf89Q6UWU4 347 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 STX19Q8N4C7 294 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 BEST2Q8NFU1 509 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 UBE2OQ9C0C9 1292 aaKnown RBP5.39□□□□□ -1.55
SCN11A-202ENST00000444237 HTR3EA5X5Y0 456 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 GOLGA8MH3BSY2 632 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 RGL2O15211 777 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TM9SF1O15321 606 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PHGDHO43175 533 aaKnown RBP5.39□□□□□ -1.55
SCN11A-202ENST00000444237 MTSS1O43312 755 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 SEMA3DO95025 777 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 MYL2P10916 166 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 CASP1P29466 404 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TIMM10P62072 90 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 CTDSPL2Q05D32 466 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 MAPK6Q16659 721 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 EDRF1Q3B7T1 1238 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 TMC4Q7Z404 712 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 EXOC3L1Q86VI1 746 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PDPRQ8NCN5 879 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF507Q8TCN5 953 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 AIFM3Q96NN9 605 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 GCNAQ96QF7 691 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 WHRNQ9P202 907 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 MBD2Q9UBB5 411 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 ADAMTS13Q76LX8 1427 aa5.39□□□□□ -1.55
SCN11A-202ENST00000444237 PNMA8CA0A1B0GUJ8 204 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms