RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 NQO1P15559 274 aaKnown RBP20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 PECAM1P16284 738 aaPredicted RBP20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 ITIH2P19823 946 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 MAMLD1Q13495 774 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 TRMT10CQ7L0Y3 403 aaKnown RBP20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 ECHDC2Q86YB7 292 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 CCDC33Q8N5R6 958 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
PAXBP1-204ENST00000443785 MGRN1O60291 552 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 CBX6O95503 412 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 POLGP54098 1239 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 HADHBP55084 474 aaKnown RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 TRIM68Q6AZZ1 485 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 DCUN1D2Q6PH85 259 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 RHBDF2Q6PJF5 856 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 VSIG1Q86XK7 387 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 STMN4Q9H169 189 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 PCSK1NQ9UHG2 260 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 MCM8Q9UJA3 840 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 DNAJC8O75937 253 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 SSTR1P30872 391 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 RPA3P35244 121 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 EP400NLQ6ZTU2 488 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 C4orf19Q8IY42 314 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 RBBP8NLQ8NC74 664 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 TRAIPQ9BWF2 469 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 RBAKQ9NYW8 714 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 AGO2Q9UKV8 859 aaKnown RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 GRID1Q9ULK0 1009 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 NEU2Q9Y3R4 380 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 GREB1LQ9C091 1923 aaPredicted RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 C2orf71A6NGG8 1288 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 VNN1O95497 513 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 CA4P22748 312 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 GTF2H1P32780 548 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 HMGCS2P54868 508 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 RFX8Q6ZV50 586 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 EMC1Q8N766 993 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 MOV10L1Q9BXT6 1211 aaKnown RBP20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
PAXBP1-204ENST00000443785 P4HA2O15460 535 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 GGPS1O95749 300 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 GJB1P08034 283 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 ANKLE1Q8NAG6 615 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 MRIQ9BWK5 157 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 WHRNQ9P202 907 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 NXF1Q9UBU9 619 aaKnown RBP20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 ATAD5Q96QE3 1844 aa20.08■□□□□ 0.81
PAXBP1-204ENST00000443785 TRAF1Q13077 416 aa20.08■□□□□ 0.8
PAXBP1-204ENST00000443785 FMNL3Q8IVF7 1028 aa20.08■□□□□ 0.8
PAXBP1-204ENST00000443785 SLC24A3Q9HC58 644 aa20.08■□□□□ 0.8
PAXBP1-204ENST00000443785 KLHL14Q9P2G3 628 aa20.08■□□□□ 0.8
PAXBP1-204ENST00000443785 PCDHB2Q9Y5E7 798 aa20.08■□□□□ 0.8
PAXBP1-204ENST00000443785 PROSCO94903 275 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 SRGAP2CP0DJJ0 459 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 SESN3P58005 492 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 COPS2P61201 443 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 OGDHQ02218 1023 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 PDIA2Q13087 525 aaKnown RBP20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 ASAP3Q8TDY4 903 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 IFT74Q96LB3 600 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 SERPINB12Q96P63 405 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 RGS20O76081 388 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 GCLCP48506 637 aaPredicted RBP20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 GSCP56915 257 aaPredicted RBP20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 SP2Q02086 613 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 ITIH4Q14624 930 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 C3orf20Q8ND61 904 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 C7orf43Q8WVR3 580 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 MSTO1Q9BUK6 570 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 MYLK2Q9H1R3 596 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 LTBP4Q8N2S1 1624 aa20.07■□□□□ 0.8
PAXBP1-204ENST00000443785 SRRM3A6NNA2 597 aaPredicted RBP20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 F5H423 210 aaPredicted RBP20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 CD19P15391 556 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 TAC1P20366 129 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 PAX7P23759 505 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 RAP1GAPP47736 663 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 PTK6Q13882 451 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 SLC1A5Q15758 541 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 RHOT1Q8IXI2 618 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 LTBP1Q14766 1721 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 FGFR1P11362 822 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 NBPF12Q5TAG4 269 aaPredicted RBP20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 MFSD14AQ96MC6 490 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 GJA3Q9Y6H8 435 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 NRXN2Q9P2S2 1712 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 K7ERI5 159 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 GDF10P55107 478 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 ACTR2P61160 394 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 STRN3Q13033 797 aa20.06■□□□□ 0.8
PAXBP1-204ENST00000443785 TAF5Q15542 800 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms