RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ZNF606Q8WXB4 792 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 TFAP2BQ92481 460 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ACAP3Q96P50 834 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 RPS6KC1Q96S38 1066 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 OSMRQ99650 979 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 NUP85Q9BW27 656 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 EIF2AQ9BY44 585 aaKnown RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 PDCL3Q9H2J4 239 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 CISHQ9NSE2 258 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 RBM12Q9NTZ6 932 aaKnown RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 CTTNBP2NLQ9P2B4 639 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 TTC7AQ9ULT0 858 aaPredicted RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 C2CD2Q9Y426 696 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 MGAMO43451 1857 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 TCRBV5S1A1TA0A578 114 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 BHMG1C9JSJ3 638 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 RRP9O43818 475 aaKnown RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 ADAMTS4O75173 837 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ERLIN2O94905 339 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 TUBBP07437 444 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 MYBL1P10243 752 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 COMTP21964 271 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 CTNNA2P26232 953 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ATICP31939 592 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CDH5P33151 784 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 PAFAH1B1P43034 410 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 RGS19P49795 217 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 DNA2P51530 1060 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 GUCY2FP51841 1108 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CRYBB1P53674 252 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 CACNB2Q08289 660 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 SNX17Q15036 470 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 XKR4Q5GH76 650 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 BEND6Q5SZJ8 279 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 NAA35Q5VZE5 725 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 MFSD14CQ5VZR4 134 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CCSAPQ6IQ19 270 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 SLC27A1Q6PCB7 646 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CATSPER4Q7RTX7 472 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 NT5DC4Q86YG4 428 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CD302Q8IX05 232 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 WDTC1Q8N5D0 677 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 USP38Q8NB14 1042 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 KLHDC9Q8NEP7 349 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ZNF564Q8TBZ8 553 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 UBE2Q2Q8WVN8 375 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CPA5Q8WXQ8 436 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ALG3Q92685 438 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 SNX27Q96L92 541 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ZMAT2Q96NC0 199 aaKnown RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 MTG1Q9BT17 334 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 LRRC1Q9BTT6 524 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 PLEKHA5Q9HAU0 1116 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 ARGLU1Q9NWB6 273 aaPredicted RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 SNTG2Q9NY99 539 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 UVRAGQ9P2Y5 699 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 CNOT8Q9UFF9 292 aaKnown RBP9.15□□□□□ -0.94
RER1-205ENST00000443438 PCDHGC3Q9UN70 934 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 DERAQ9Y315 318 aa9.15□□□□□ -0.94
RER1-205ENST00000443438 SEPT4O43236 478 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 THAP12O43422 761 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 CEP104O60308 925 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 SASH3O75995 380 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 ITGB3P05106 788 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 CD58P19256 250 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 RRM1P23921 792 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 BRD2P25440 801 aaKnown RBP9.14□□□□□ -0.95
RER1-205ENST00000443438 AXLP30530 894 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
RER1-205ENST00000443438 RAP1GAPP47736 663 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 MARCKSL1P49006 195 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 RAD23BP54727 409 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 CDH8P55286 799 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 RBP5P82980 135 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 NOGQ13253 232 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 TMEM132DQ14C87 1099 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 NBPF20Q3BBV1 942 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 ZNF667Q5HYK9 610 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 CCDC181Q5TID7 509 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 PLEKHA7Q6IQ23 1121 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 LLGL2Q6P1M3 1020 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
RER1-205ENST00000443438 KRT35Q92764 455 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 WNT8BQ93098 351 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 VCPIP1Q96JH7 1222 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 BTBD6Q96KE9 485 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 SCLT1Q96NL6 688 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 TWNKQ96RR1 684 aa9.14□□□□□ -0.95
RER1-205ENST00000443438 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.95
RER1-205ENST00000443438 CCDC94Q9BW85 323 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms