RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 NEMP1O14524 444 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 SPAG6O75602 509 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 BAIAP3O94812 1187 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 POLR2EP19388 210 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 SLC1A1P43005 524 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PHKA1P46020 1223 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PROSER3Q2NL68 480 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ANO7Q6IWH7 933 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 OXNAD1Q96HP4 312 aaPredicted RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 C7orf25Q9BPX7 421 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PCIF1Q9H4Z3 704 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 STK39Q9UEW8 545 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 MKL2Q9ULH7 1088 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 LRRC10BA6NIK2 292 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PCP4L1A6NKN8 68 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 DDX39AO00148 427 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 USP1O94782 785 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ALOX5P09917 674 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TAC1P20366 129 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TUBA3CQ13748 450 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PFKFB3Q16875 520 aaPredicted RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 PERM1Q5SV97 790 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIN54-202ENST00000442461 ZNF398Q8TD17 642 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TRPC4APQ8TEL6 797 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 FNIP1Q8TF40 1166 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 HPS1Q92902 700 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 EYA3Q99504 573 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TM9SF1O15321 606 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PHGDHO43175 533 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 WEE2P0C1S8 567 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 TPBGLP0DKB5 382 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 RARAP10276 462 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 UQCRBP14927 111 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 CDK16Q00536 496 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 CTTNQ14247 550 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 CEP78Q5JTW2 689 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PACS1Q6VY07 963 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 NDUFAF2Q8N183 169 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 HPS3Q969F9 1004 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 NCLNQ969V3 563 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ACCSQ96QU6 501 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 CHID1Q9BWS9 393 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 BBS2Q9BXC9 721 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 EPS8L2Q9H6S3 715 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 SCN3BQ9NY72 215 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 UTYO14607 1347 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PJA2O43164 708 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 CYTH3O43739 400 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 NUDT17P0C025 328 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 SARSP49591 514 aaKnown RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 SERPINB9P50453 376 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 NPEPPSP55786 919 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 MECOMQ03112 1051 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 NT5DC1Q5TFE4 455 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 SEPT1Q8WYJ6 367 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 EFCAB1Q9HAE3 211 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 SLC24A2Q9UI40 661 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 GRID1Q9ULK0 1009 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 ABCB11O95342 1321 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PDZK1P1A8MUH7 402 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 TPST1O60507 370 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 CHEK2O96017 543 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 TCIRG1Q13488 830 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 SLC12A1Q13621 1099 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 AUHQ13825 339 aaKnown RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 EGFLAMQ63HQ2 1017 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 TTC37Q6PGP7 1564 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 ZNF75CPQ92670 426 aaPredicted RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 INTS2Q9H0H0 1204 aaKnown RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 CYP26B1Q9NR63 512 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 DDX56Q9NY93 547 aaKnown RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 ARMCX1Q9P291 453 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 BARX2Q9UMQ3 279 aaPredicted RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 COQ6Q9Y2Z9 468 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 CPDO75976 1380 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PRKAB2O43741 272 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 DGKIO75912 1065 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 KRT6AP02538 564 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 KRT6BP04259 564 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 KRT19P08727 400 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 ZNF12P17014 697 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 HDDC2Q7Z4H3 204 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PEX5LQ8IYB4 626 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 TCAIMQ8N3R3 496 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PCDH18Q9HCL0 1135 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 PCMTD2Q9NV79 361 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 FBXO9Q9UK97 447 aaPredicted RBP10.8□□□□□ -0.68
LIN54-202ENST00000442461 JAG2Q9Y219 1238 aa10.8□□□□□ -0.68
LIN54-202ENST00000442461 C15orf38-AP3S2A0A0A6YYH1 394 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 FAM205CA6NFA0 338 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 HIBADHP31937 336 aaKnown RBP10.79□□□□□ -0.68
LIN54-202ENST00000442461 CENPCQ03188 943 aa10.79□□□□□ -0.68
LIN54-202ENST00000442461 ANO4Q32M45 955 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms