RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ELMO3Q96BJ8 720 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 SNTG2Q9NY99 539 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 HTTP42858 3142 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 A0A0U1RQJ8 604 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 MYCP01106 439 aaPredicted RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ARHGAP25P42331 645 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 MYL6P60660 151 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 C1QTNF8P60827 252 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 GNG11P61952 73 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 MGAT3Q09327 533 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 CUL2Q13617 745 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 TBC1D25Q3MII6 688 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 CCDC122Q5T0U0 273 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 TMCO3Q6UWJ1 677 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ATRIPQ8WXE1 791 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 FAM107BQ9H098 131 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ARGLU1Q9NWB6 273 aaPredicted RBP8.65□□□□□ -1.02
CCDC39-201ENST00000442201 ST3GAL5Q9UNP4 418 aa8.65□□□□□ -1.02
CCDC39-201ENST00000442201 GPR182O15218 404 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.03
CCDC39-201ENST00000442201 PPFIA2O75334 1257 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 KRT19P08727 400 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 KRT5P13647 590 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 SMC1AQ14683 1233 aaKnown RBP8.65□□□□□ -1.03
CCDC39-201ENST00000442201 LRRC31Q6UY01 552 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 SLC43A3Q8NBI5 491 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 DEFB118Q96PH6 123 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 TSGA10Q9BZW7 698 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 RNF208Q9H0X6 261 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.03
CCDC39-201ENST00000442201 APOBEC3GQ9HC16 384 aaKnown RBP8.65□□□□□ -1.03
CCDC39-201ENST00000442201 PAK6Q9NQU5 681 aaPredicted RBP8.65□□□□□ -1.03
CCDC39-201ENST00000442201 HES2Q9Y543 173 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 NUB1Q9Y5A7 615 aa8.65□□□□□ -1.03
CCDC39-201ENST00000442201 DNM1LO00429 736 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 CYP26A1O43174 497 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 SASH3O75995 380 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 RECQL4O94761 1208 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 RPS6KA3P51812 740 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 MTFR1Q15390 333 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 PDCD2Q16342 344 aaPredicted RBP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 ZNF699Q32M78 642 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 UBXN11Q5T124 520 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 C10orf76Q5T2E6 689 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 ALKBH5Q6P6C2 394 aaKnown RBP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 DRAXINQ8NBI3 349 aaPredicted RBP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 DHX38Q92620 1227 aaKnown RBP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 TAF4BQ92750 862 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 SNX27Q96L92 541 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 SLX1AQ9BQ83 275 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 SEZ6LQ9BYH1 1024 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 NIF3L1Q9GZT8 377 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 CHST12Q9NRB3 414 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 DNAI1Q9UI46 699 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 DERAQ9Y315 318 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 ARVCFO00192 962 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 NEBLO76041 1014 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 ITGB3P05106 788 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 CCL5P13501 91 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 TNFAIP3P21580 790 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM71Q2Q1W2 868 aaKnown RBP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 TRPV6Q9H1D0 765 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 IRAK4Q9NWZ3 460 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC39-201ENST00000442201 CENPFP49454 3210 aa8.64□□□□□ -1.03
CCDC39-201ENST00000442201 RCCD1A6NED2 376 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 DDX3XO00571 662 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 GHRP10912 638 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PDE6CP51160 858 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 BPIFB4P59827 614 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 NAB2Q15742 525 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 FAM26DQ5JW98 314 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 FBXO47Q5MNV8 452 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 HACE1Q8IYU2 909 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 USP38Q8NB14 1042 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 AGPAT1Q99943 283 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SYT11Q9BT88 431 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 IRX2Q9BZI1 471 aaPredicted RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SEPT11Q9NVA2 429 aaKnown RBP8.63□□□□□ -1.03
CCDC39-201ENST00000442201 MYO1AQ9UBC5 1043 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 TRIM10Q9UDY6 481 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 PARP2Q9UGN5 583 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 ITGA11Q9UKX5 1188 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 TFR2Q9UP52 801 aa8.63□□□□□ -1.03
CCDC39-201ENST00000442201 IPPQ9Y573 584 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 413.7 ms